DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and XB5864179

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_002931495.3 Gene:XB5864179 / 100488386 XenbaseID:XB-GENE-5864180 Length:519 Species:Xenopus tropicalis


Alignment Length:515 Identity:178/515 - (34%)
Similarity:290/515 - (56%) Gaps:41/515 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ASALFVGLLLY-----HLKFKRLIDLISYMPGPPVLPLVGHGHHF--IGKPPHEMV--KKIFEFM 65
            |:.|.:.|:||     ::..::|:...|..|||....|.|:.:.|  |||....::  .::|.: 
 Frog    22 AAWLCLLLVLYKAAQLYVWRRKLVAAFSPFPGPKCHWLYGNTYEFLQIGKDLDLVLGWAQVFPY- 85

  Fly    66 ETYSKDQVLKVWLGP-ELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHK 129
                   .:.:|||. ...:::.:|...:.||......|... ||.:.||:.|||||..|.||.:
 Frog    86 -------GMPLWLGNFYATLIITHPDYAKAVLARQDPKDDMA-YKFIVPWIGEGLLVLSGPKWFQ 142

  Fly   130 RRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGV 194
            .|:::||.||:.:|..:|.:....:|.:|.  :.|:|...:....|:.:::|.|:|||.:.|...
 Frog   143 HRRLLTPGFHYDVLKPYVTLMSDCTRVMLD--KWDKLMPNEKSVELFHYVSLMTLDTIMKCAFSY 205

  Fly   195 SINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQR 259
            :.:.|:|.|:.|:.||..:|.::.:|.....|...|.:.|:||....:|||:..||.|:|:|.||
 Frog   206 NTSCQNNRDNAYINAVYELSYLVDQRFRFFPYHNKLIFHLSPLGFRFRKALSTAHQHTDKVIKQR 270

  Fly   260 REELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE--RPLSNLDIREEVDTFMFEGHDTTS 322
            :|.|:.|....:       :..||.:.|||||| ...||  :.||:.|:|.|||||||||||||:
 Frog   271 KESLMHETELDK-------IRQKRHLDFLDILL-CAKDENGKGLSDEDLRAEVDTFMFEGHDTTA 327

  Fly   323 SALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLG 387
            |.:.:..|.||.:||.|:||.|||..::|..::  :.::.|.::.|..||:||:||:||.||.:|
 Frog   328 SGISWILYCIAKYPEHQQKCREEITELLGERET--MGWDDLGKIPYTTLCIKESLRLYPPVPGIG 390

  Fly   388 R---KVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPF 449
            |   |.:..|:  |:.:|.|.:|.:|...:.|...|:.:|.:|.|.|| :...::..:|:|::||
 Frog   391 RRLSKPITFCD--GRSLPEGASIILSIYSINRSPSLWKDPEVFDPLRF-LPENSDNRHPHAFLPF 452

  Fly   450 SAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRE 509
            ||||||||||.|||.|:|..||..|:.||:  ..|....|..:.:::||:...:..|:|:
 Frog   453 SAGPRNCIGQNFAMNEMKVAVALTLQRYEL--FPDPDNEPQKVPQIVLRSLNGIHVKLRK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 169/481 (35%)
XB5864179XP_002931495.3 CYP4B-like 73..507 CDD:410771 160/459 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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