DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and cyp4b1.6

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_002931495.3 Gene:cyp4b1.6 / 100488386 XenbaseID:XB-GENE-5864180 Length:519 Species:Xenopus tropicalis


Alignment Length:515 Identity:178/515 - (34%)
Similarity:290/515 - (56%) Gaps:41/515 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ASALFVGLLLY-----HLKFKRLIDLISYMPGPPVLPLVGHGHHF--IGKPPHEMV--KKIFEFM 65
            |:.|.:.|:||     ::..::|:...|..|||....|.|:.:.|  |||....::  .::|.: 
 Frog    22 AAWLCLLLVLYKAAQLYVWRRKLVAAFSPFPGPKCHWLYGNTYEFLQIGKDLDLVLGWAQVFPY- 85

  Fly    66 ETYSKDQVLKVWLGP-ELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHK 129
                   .:.:|||. ...:::.:|...:.||......|... ||.:.||:.|||||..|.||.:
 Frog    86 -------GMPLWLGNFYATLIITHPDYAKAVLARQDPKDDMA-YKFIVPWIGEGLLVLSGPKWFQ 142

  Fly   130 RRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGV 194
            .|:::||.||:.:|..:|.:....:|.:|.  :.|:|...:....|:.:::|.|:|||.:.|...
 Frog   143 HRRLLTPGFHYDVLKPYVTLMSDCTRVMLD--KWDKLMPNEKSVELFHYVSLMTLDTIMKCAFSY 205

  Fly   195 SINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQR 259
            :.:.|:|.|:.|:.||..:|.::.:|.....|...|.:.|:||....:|||:..||.|:|:|.||
 Frog   206 NTSCQNNRDNAYINAVYELSYLVDQRFRFFPYHNKLIFHLSPLGFRFRKALSTAHQHTDKVIKQR 270

  Fly   260 REELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE--RPLSNLDIREEVDTFMFEGHDTTS 322
            :|.|:.|....:       :..||.:.|||||| ...||  :.||:.|:|.|||||||||||||:
 Frog   271 KESLMHETELDK-------IRQKRHLDFLDILL-CAKDENGKGLSDEDLRAEVDTFMFEGHDTTA 327

  Fly   323 SALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLG 387
            |.:.:..|.||.:||.|:||.|||..::|..::  :.::.|.::.|..||:||:||:||.||.:|
 Frog   328 SGISWILYCIAKYPEHQQKCREEITELLGERET--MGWDDLGKIPYTTLCIKESLRLYPPVPGIG 390

  Fly   388 R---KVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPF 449
            |   |.:..|:  |:.:|.|.:|.:|...:.|...|:.:|.:|.|.|| :...::..:|:|::||
 Frog   391 RRLSKPITFCD--GRSLPEGASIILSIYSINRSPSLWKDPEVFDPLRF-LPENSDNRHPHAFLPF 452

  Fly   450 SAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRE 509
            ||||||||||.|||.|:|..||..|:.||:  ..|....|..:.:::||:...:..|:|:
 Frog   453 SAGPRNCIGQNFAMNEMKVAVALTLQRYEL--FPDPDNEPQKVPQIVLRSLNGIHVKLRK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 159/436 (36%)
cyp4b1.6XP_002931495.3 CYP4B-like 73..507 CDD:410771 160/459 (35%)

Return to query results.
Submit another query.