DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and LOC100488078

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_012817051.1 Gene:LOC100488078 / 100488078 -ID:- Length:510 Species:Xenopus tropicalis


Alignment Length:512 Identity:172/512 - (33%)
Similarity:284/512 - (55%) Gaps:37/512 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ASALFVGLLLY-----HLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETYS 69
            |::|.:.||||     :||.:.|:...|..|||....|.|:.|.|      ....|..:.:..|:
 Frog    18 AASLCLLLLLYKATQLYLKRRFLVAAFSPFPGPKCHWLYGNAHEF------NTDGKDMDIIMNYA 76

  Fly    70 K--DQVLKVWLGPEL-NVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHKRR 131
            |  .....:|||... ::::.:|...:.:|......|..| |..|.||:.:||||..|:||.:.|
 Frog    77 KKYPYAYPMWLGNFFASLIICHPDYAKAILSRQDPKDDFG-YYFLTPWIGKGLLVLSGQKWFQHR 140

  Fly   132 KIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGVSI 196
            :::|||||:.:|..:|::....|..:|.  :.|:.........|:..::|.|:|:|.:.|.....
 Frog   141 RLLTPAFHYDVLKPYVKLMADCSNVMLD--KWDKEISDKKPVELFHHVSLMTLDSIMKCAFSYHS 203

  Fly   197 NAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRRE 261
            |.|:|::::|::||..:|.::..|...:.|..|..:.|:|.....::||.|.|..|:|:|.||::
 Frog   204 NCQNNSENKYIKAVYELSYLVDHRFTFLPYHSDFIFYLSPHGFRFRRALKVAHDHTDKVIKQRKK 268

  Fly   262 ELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE--RPLSNLDIREEVDTFMFEGHDTTSSA 324
            .|       ...|:...:..||.:.|||||| ...||  :.||:.|:|.|||||||||||||:|.
 Frog   269 SL-------HEQNELEKIQQKRHLDFLDILL-CAKDENGKGLSDEDLRAEVDTFMFEGHDTTASG 325

  Fly   325 LMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRK 389
            :.:..|.:|.:||.|:||.||||.|:|..::  |.::.|.::.|..||:||:||:||.||.:.|:
 Frog   326 ISWTLYCMAKYPEHQQKCREEIRDVLGGKQT--VDWDDLGKMPYTTLCIKESLRLYPPVPGIARQ 388

  Fly   390 VLED---CEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSA 451
            :.:.   |:  |:.:|..:.:.:|...:.|...::.:|.:|.|.||....:| |.|.:|::||||
 Frog   389 LTQPITFCD--GRSLPKDSMVLLSLYAINRCSSIWEDPEVFDPMRFSAENSA-KRNSHAFLPFSA 450

  Fly   452 GPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVR 508
            |.||||||.|||.|:|..:|..|:.:|:  ..|:...|:...:|:||:...:..|::
 Frog   451 GSRNCIGQNFAMNEMKVALALTLQRFEL--FPDTGIEPLTAPQLVLRSLNGIHLKLK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 161/479 (34%)
LOC100488078XP_012817051.1 p450 48..502 CDD:278495 161/477 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D214327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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