DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and cyp4v2.1

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_002934446.1 Gene:cyp4v2.1 / 100485929 XenbaseID:XB-GENE-22069503 Length:523 Species:Xenopus tropicalis


Alignment Length:514 Identity:211/514 - (41%)
Similarity:308/514 - (59%) Gaps:19/514 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVIGAILASALFVGLLLYHLKFKRLIDLISYMPGP-PVLPLVGHGHHFIGKPPHEMVKKIFEFME 66
            :|:..:||.::...|..|..|:|    |:..:||| |..|:||.. .|:.....:...::.||.|
 Frog    17 VVLLTLLALSILPALQDYVRKWK----LMKPIPGPGPNYPIVGDA-LFLKPNGGDFFLQMCEFTE 76

  Fly    67 TYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHKRR 131
            ::..:.::|:|:||...:::.:...||.:|.|.:..|||..||.|.|||.:|||.|.|.||..||
 Frog    77 SFRSEPLIKIWIGPIPFIIVYHADTVEPILSTSKHMDKAYSYKFLHPWLGKGLLTSTGEKWRSRR 141

  Fly   132 KIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGD-SGFSLYDWINLCTMDTICETAMGVS 195
            |:|||.|||.||.:|:||..:.|:.|:..::    ||.| ..|:.:..:.||.:|.|.|||||..
 Frog   142 KMITPTFHFAILSEFLEVMNEQSKILVEKLQ----KHVDGESFNCFMDVTLCALDIISETAMGRK 202

  Fly   196 INAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRR 260
            |.||||.|||||.|:..:|.::.:|........|..|......:...|.|.:||.||:|.|::|.
 Frog   203 IQAQSNRDSEYVHAIYKMSDIIQRRQKMPWLWLDFFYAYLKDGKEHDKNLKILHAFTDKAILERA 267

  Fly   261 EELIREGSSQESSNDDADVGA---KRKMAFLDILLQSTVDE-RPLSNLDIREEVDTFMFEGHDTT 321
            |||.:.| .|:..:.|:|..:   |::.||||:||.:|.|. ..:|.:|||||||||||||||||
 Frog   268 EELKKMG-EQKKEHCDSDPESDKPKKRSAFLDMLLMATDDAGNKMSYMDIREEVDTFMFEGHDTT 331

  Fly   322 SSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLL 386
            ::||.:..:.:.:|||||::..:|:..|.|. ...||:.:.|.:|.|::..:||.||:|||||..
 Frog   332 AAALNWSLFLLGSHPEAQRQVHKELDEVFGK-SDRPVTMDDLKKLRYLEAVIKEALRIYPSVPFF 395

  Fly   387 GRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSA 451
            .|.|.|||.|.|..:|.|.|:.|.|..|.|..|.|.||..|:|||| ....|...||||||||||
 Frog   396 ARTVTEDCSIRGFHVPKGVNVVIIPYALHRDPEYFPEPEEFRPERF-FPENASGRNPYAYIPFSA 459

  Fly   452 GPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            |.||||||:||::|.|.:::::||:|.|: .....|...|:.:||||.::.:..|::.|
 Frog   460 GLRNCIGQRFALMEEKVVLSSILRNYWVE-ASQKREDLCLLGDLILRPQDGMWIKLKNR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 201/477 (42%)
cyp4v2.1XP_002934446.1 p450 45..509 CDD:365848 201/472 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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