DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and cyp4b1

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001120073.1 Gene:cyp4b1 / 100145080 XenbaseID:XB-GENE-5924259 Length:510 Species:Xenopus tropicalis


Alignment Length:502 Identity:170/502 - (33%)
Similarity:279/502 - (55%) Gaps:37/502 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFME-----TY 68
            |.:.|.....|| |..||..::....||||       .|..:|..  :.:::..:.::     |:
 Frog    25 LLAVLLKATQLY-LSQKRQENIFKQFPGPP-------RHWLLGNV--DQIRRDGKDLDLLVNWTH 79

  Fly    69 SKDQVLKVWLGPELNVL-MGNPKDVEVVLGTLRFNDKAG-EYKALEPWLKEGLLVSRGRKWHKRR 131
            .......||.|...:.| :.:|...:|:.|  |...|:. .|..|.||:.:||||..|.||.:.|
 Frog    80 KNGGAFPVWFGNFSSFLFLTHPDYAKVIFG--REEPKSSISYDFLVPWIGKGLLVLTGPKWFQHR 142

  Fly   132 KIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGVSI 196
            :::||.||:.:|..:|.:..|.:.|:|.|.|  :|........|:..::|.|:|:|.:.|.....
 Frog   143 RLLTPGFHYDVLKPYVNLISKCTTDMLDNWE--KLITKQKTVELFQHLSLMTLDSIMKCAFSYDS 205

  Fly   197 NAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRRE 261
            |.|.::::.|::||..:|.|.:.|:....|..|..:.|:|.....:||..:.|:.|:|:|.||:|
 Frog   206 NCQKDSNNAYIKAVFDLSYVANLRLRCFPYHNDTVFYLSPHGYRFRKACRITHEHTDKVIQQRKE 270

  Fly   262 ELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDER--PLSNLDIREEVDTFMFEGHDTTSSA 324
            .:..|...::       :..||.:.||||||.:. ||:  .||:.|:|.|||||||||||||:|.
 Frog   271 SMKLEKELEK-------IQQKRHLDFLDILLFAR-DEKGHGLSDDDLRAEVDTFMFEGHDTTASG 327

  Fly   325 LMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRK 389
            :.:..|.:|.:||.|:||.|||:.|:|:.:.  :.:|.|.::.|.::|:||:|||||.||.:.|:
 Frog   328 ISWILYCMAKYPEHQQKCREEIKEVLGDRQI--MEWEDLGKIPYTNMCIKESLRMYPPVPGVARQ 390

  Fly   390 VLEDCE-INGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGP 453
            :..... .:|:.:||||.||:|...:.:...::.:|.:|.|.||....:|.: :.:|::||:|||
 Frog   391 LRNPVTFFDGRSVPAGTLIGLSIYAIHKNPAVWEDPEVFNPLRFSPENSANR-HSHAFLPFAAGP 454

  Fly   454 RNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTK 500
            ||||||.|||.|:|..||..|..:.:  ..|...||:.|.:|:|::|
 Frog   455 RNCIGQNFAMNEMKVAVALTLNRFHL--APDLENPPIKIPQLVLKSK 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 163/476 (34%)
cyp4b1NP_001120073.1 p450 50..503 CDD:278495 163/476 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.