DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bcn92 and lyrm4a

DIOPT Version :10

Sequence 1:NP_477059.2 Gene:bcn92 / 31186 FlyBaseID:FBgn0013432 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_001157713.1 Gene:lyrm4a / 100302660 ZFINID:ZDB-GENE-081104-295 Length:89 Species:Danio rerio


Alignment Length:85 Identity:39/85 - (45%)
Similarity:59/85 - (69%) Gaps:0/85 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TRRQAITLYRNLLRESEKLPSYNFRMYAARKIRDTFRANRSTRDFAEIDRQMAEGQQNLELIRRQ 67
            :|.|.|:|||.|::||:|.||||:|.||.|:::|.||.|....:...:|..:.:.::||.:|:||
Zfish     5 SRAQVISLYRMLMKESKKFPSYNYRTYALRRVKDGFRENLHVDNPRTLDLLINQARENLAVIKRQ 69

  Fly    68 VIIGHLYSADKLVIENKKTL 87
            |.|||||||.:.|:|.:..|
Zfish    70 VSIGHLYSAQRTVVEKEPHL 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcn92NP_477059.2 Complex1_LYR_LYRM4 6..74 CDD:380759 31/67 (46%)
lyrm4aNP_001157713.1 Complex1_LYR_LYRM4 8..76 CDD:380759 31/67 (46%)

Return to query results.
Submit another query.