DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgd and AT5G41670

DIOPT Version :9

Sequence 1:NP_001259175.1 Gene:Pgd / 31185 FlyBaseID:FBgn0004654 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001318724.1 Gene:AT5G41670 / 834169 AraportID:AT5G41670 Length:487 Species:Arabidopsis thaliana


Alignment Length:475 Identity:236/475 - (49%)
Similarity:314/475 - (66%) Gaps:16/475 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFL---ANEAKDTKVIGADSLEDMVSKLKS 68
            |.|.|||||||||.||:.:|||.:..||||.:||.|.|   :||.| ..|.|..|..|.|..::.
plant     9 IGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGK-LPVAGQYSPRDFVLSIQR 72

  Fly    69 PRKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLLFVGSGVSGGE 133
            ||.|::|||||:.||..|..|...:..||.||||||..||:|.||..|..|.|||::|.||||||
plant    73 PRSVIILVKAGAPVDQTISALSEYMEPGDCIIDGGNEWYQNTERRIVEAEKKGLLYLGMGVSGGE 137

  Fly   134 EGARHGPSLMPGGHEAAWPLIQPIFQAICAKADGEPCCEWVGDGGAGHFVKMVHNGIEYGDMQLI 198
            ||||:||||||||...|:..::.|.:.:.|:.:..||..::|:||:|:|||||||||||||||||
plant   138 EGARNGPSLMPGGSFTAYNNVKDILEKVAAQVEDGPCVTYIGEGGSGNFVKMVHNGIEYGDMQLI 202

  Fly   199 CEAYHIMQSL-GLSADQMADEFGKWNSAELDSFLIEITRDILKYKD--GKGYLLERIRDTAGQKG 260
            .|||.::::: |||.|::|:.|.:||..||:|||:|||.||.:.||  |.|.|:::|.|..|.||
plant   203 SEAYDVLKNVGGLSNDELAEIFTEWNRGELESFLVEITSDIFRVKDDYGDGELVDKILDKTGMKG 267

  Fly   261 TGKWTAIAALQYGVPVTLIGEAVFSRCLSALKDERVQASSVLKGPSTKAQVANLT------KFLD 319
            |||||...|.:..|....|..::..|.||.|||||..|:.||:....|..:.:.:      :.:|
plant   268 TGKWTVQQAAELSVAAPTIAASLDCRYLSGLKDERENAAKVLEEAGLKEDIGSASRGVDKKRLID 332

  Fly   320 DIKHALYCAKIVSYAQGFMLMREAARENKWRLNYGGIALMWRGGCIIRSVFLGNIKDAYTSQPEL 384
            |::.|||.:||.|||||..|:|..:.|..|.||.|.:|.:|:||||||:|||..||.||...|.|
plant   333 DVRQALYASKICSYAQGMNLLRAKSLEKGWDLNLGEMARIWKGGCIIRAVFLDRIKKAYQRNPNL 397

  Fly   385 SNLLLD-DFFKKAIERGQDSWREVVANAFRWGIPVPALSTALSFYDGYRTAKLPANLLQAQRDYF 448
            ::|::| ||.|:.::| |.:||.||..|...||..|.:..:|:::|.||.|:|||||:|||||.|
plant   398 ASLVVDPDFAKEMVQR-QAAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLF 461

  Fly   449 GAHTYELLGQEGQFHHTNWT 468
            ||||||...:.|.: ||.||
plant   462 GAHTYERTDRPGAY-HTEWT 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgdNP_001259175.1 NAD_binding_2 4..176 CDD:281445 86/171 (50%)
PRK09287 15..471 CDD:236453 230/467 (49%)
6PGD 180..467 CDD:278805 145/296 (49%)
AT5G41670NP_001318724.1 PLN02350 1..487 CDD:215200 236/475 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 289 1.000 Domainoid score I367
eggNOG 1 0.900 - - E1_COG0362
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68268
Inparanoid 1 1.050 443 1.000 Inparanoid score I403
OMA 1 1.010 - - QHG62610
OrthoDB 1 1.010 - - D847823at2759
OrthoFinder 1 1.000 - - FOG0002705
OrthoInspector 1 1.000 - - otm3130
orthoMCL 1 0.900 - - OOG6_100975
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1807
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

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