DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgd and gnd1

DIOPT Version :10

Sequence 1:NP_476860.2 Gene:Pgd / 31185 FlyBaseID:FBgn0004654 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_595095.1 Gene:gnd1 / 2541146 PomBaseID:SPBC660.16 Length:492 Species:Schizosaccharomyces pombe


Alignment Length:488 Identity:318/488 - (65%)
Similarity:377/488 - (77%) Gaps:13/488 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ADIALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKDTKVIGADSLEDMVSKLKSP 69
            ||..||||||||||||||..:|||.||.||||.::|.||||||||...::||.|||:.|||||.|
pombe     7 ADFGLIGLAVMGQNLILNGADKGFTVCCYNRTTSRVDEFLANEAKGKSIVGAHSLEEFVSKLKKP 71

  Fly    70 RKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLLFVGSGVSGGEE 134
            |..:||||||..||..|:.|.|||..||:|:|||||.|.||:|||:||||.|:||||||||||||
pombe    72 RVCILLVKAGKPVDYLIEGLAPLLEKGDIIVDGGNSHYPDTTRRCEELAKKGILFVGSGVSGGEE 136

  Fly   135 GARHGPSLMPGGHEAAWPLIQPIFQAICAKA-DGEPCCEWVGDGGAGHFVKMVHNGIEYGDMQLI 198
            |||:||||||||:.||||.|:||||.:.||| :.||||:|||:.||||:||||||||||||||||
pombe   137 GARYGPSLMPGGNPAAWPRIKPIFQTLAAKAGNNEPCCDWVGEQGAGHYVKMVHNGIEYGDMQLI 201

  Fly   199 CEAYHIM-QSLGLSADQMADEFGKWNSAELDSFLIEITRDILKYK--DGKGYLLERIRDTAGQKG 260
            ||.|.|| :.||:|.|::||.|.|||:.:|||||||||||:|:||  |||. |:|:|.|.|||||
pombe   202 CETYDIMKRGLGMSCDEIADVFEKWNTGKLDSFLIEITRDVLRYKADDGKP-LVEKILDAAGQKG 265

  Fly   261 TGKWTAIAALQYGVPVTLIGEAVFSRCLSALKDERVQASSVLKGPSTKAQVANLTKFLDDIKHAL 325
            ||||||..||:.|.||:||.||||:||||:||.|||:||..|.||:||. ..:..:.:||::.||
pombe   266 TGKWTAQNALEMGTPVSLITEAVFARCLSSLKSERVRASKKLTGPNTKF-TGDKKQLIDDLEDAL 329

  Fly   326 YCAKIVSYAQGFMLMREAARENKWRLNYGGIALMWRGGCIIRSVFLGNIKDAYTSQPELSNLLLD 390
            |.:||:|||||||||||||:|..|:||..|||||||||||||||||.:|.:|:...|.|.::|..
pombe   330 YASKIISYAQGFMLMREAAKEYGWKLNNAGIALMWRGGCIIRSVFLKDITEAFREDPNLESILFH 394

  Fly   391 DFFKKAIERGQDSWREVVANAFRWGIPVPALSTALSFYDGYRTAKLPANLLQAQRDYFGAHTYEL 455
            .||...:|:.|..||.|||.|...||||||.||.||||||||:|.|||||||||||||||||:.:
pombe   395 PFFTNGVEKAQAGWRRVVAQAAMLGIPVPATSTGLSFYDGYRSAVLPANLLQAQRDYFGAHTFRV 459

  Fly   456 LGQEGQFH-------HTNWTGTGGNVSASTYQA 481
            |.:.....       |.||||.|||:||:||.|
pombe   460 LPEAADKSLPADKDIHINWTGHGGNISATTYDA 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgdNP_476860.2 Gnd 3..467 CDD:440131 306/472 (65%)
gnd1NP_595095.1 Gnd 7..478 CDD:440131 306/472 (65%)

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