DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgd and T25B9.9

DIOPT Version :9

Sequence 1:NP_001259175.1 Gene:Pgd / 31185 FlyBaseID:FBgn0004654 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_501998.1 Gene:T25B9.9 / 177971 WormBaseID:WBGene00012015 Length:484 Species:Caenorhabditis elegans


Alignment Length:482 Identity:315/482 - (65%)
Similarity:384/482 - (79%) Gaps:4/482 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QADIALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKDTKVIGADSLEDMVSKLKS 68
            :||||:||||||||||||||::.||.|||:||||..|.:|||||||.||:|||.|:|:|..|||.
 Worm     3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMCKKLKR 67

  Fly    69 PRKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLLFVGSGVSGGE 133
            ||:||:|:|||:.||..|..:||.|..||:|||||||||.|::||.::||..|::|||.||||||
 Worm    68 PRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIMFVGCGVSGGE 132

  Fly   134 EGARHGPSLMPGGHEAAWPLIQPIFQAICAKADGEPCCEWVGDGGAGHFVKMVHNGIEYGDMQLI 198
            ||||.||||||||:..|||.::.|||.|.||::|||||:|||:.|:|||||||||||||||||||
 Worm   133 EGARFGPSLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHFVKMVHNGIEYGDMQLI 197

  Fly   199 CEAYHIM-QSLGLSADQMADEFGKWNSAELDSFLIEITRDILKYKDGKGY-LLERIRDTAGQKGT 261
            .||||:: :::.|:.||||:....||..||:|||||||.:||||:|.:|. ::.:|||:||||||
 Worm   198 AEAYHLLSKAVELNHDQMAEVLDDWNKGELESFLIEITANILKYRDEQGEPIVPKIRDSAGQKGT 262

  Fly   262 GKWTAIAALQYGVPVTLIGEAVFSRCLSALKDERVQASSVLKGP--STKAQVANLTKFLDDIKHA 324
            ||||..|||:||:||||||||||:|||||||||||:||..|..|  |....|.:...|:..|..|
 Worm   263 GKWTCFAALEYGLPVTLIGEAVFARCLSALKDERVRASKQLPRPQVSPDTVVQDKRVFIKQISKA 327

  Fly   325 LYCAKIVSYAQGFMLMREAARENKWRLNYGGIALMWRGGCIIRSVFLGNIKDAYTSQPELSNLLL 389
            ||.:|||||||||||:.||:::..|.||:|.|||||||||||||.|||:|:.|:....:||||||
 Worm   328 LYASKIVSYAQGFMLLAEASKQFNWNLNFGAIALMWRGGCIIRSRFLGDIEHAFQKNKQLSNLLL 392

  Fly   390 DDFFKKAIERGQDSWREVVANAFRWGIPVPALSTALSFYDGYRTAKLPANLLQAQRDYFGAHTYE 454
            ||||.|||...|||||.||..|.|.||||||.|:||:|||||.:..:||||||||||||||||||
 Worm   393 DDFFTKAITEAQDSWRVVVCAAVRLGIPVPAFSSALAFYDGYTSEVVPANLLQAQRDYFGAHTYE 457

  Fly   455 LLGQEGQFHHTNWTGTGGNVSASTYQA 481
            ||.:.|.:.|||||||||.|:::.|.|
 Worm   458 LLAKPGTWVHTNWTGTGGRVTSNAYNA 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgdNP_001259175.1 NAD_binding_2 4..176 CDD:281445 114/171 (67%)
PRK09287 15..471 CDD:236453 300/459 (65%)
6PGD 180..467 CDD:278805 189/290 (65%)
T25B9.9NP_501998.1 NAD_binding_2 4..174 CDD:281445 113/169 (67%)
PRK09287 14..474 CDD:236453 300/459 (65%)
6PGD 179..470 CDD:278805 189/290 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167294
Domainoid 1 1.000 379 1.000 Domainoid score I451
eggNOG 1 0.900 - - E1_COG0362
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68268
Inparanoid 1 1.050 638 1.000 Inparanoid score I453
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62610
OrthoDB 1 1.010 - - D189465at33208
OrthoFinder 1 1.000 - - FOG0002705
OrthoInspector 1 1.000 - - oto19639
orthoMCL 1 0.900 - - OOG6_100975
Panther 1 1.100 - - LDO PTHR11811
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4
SonicParanoid 1 1.000 - - X1807
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

Return to query results.
Submit another query.