DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgd and Pgd

DIOPT Version :10

Sequence 1:NP_476860.2 Gene:Pgd / 31185 FlyBaseID:FBgn0004654 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001074743.1 Gene:Pgd / 110208 MGIID:97553 Length:483 Species:Mus musculus


Alignment Length:481 Identity:347/481 - (72%)
Similarity:405/481 - (84%) Gaps:3/481 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QADIALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKDTKVIGADSLEDMVSKLKS 68
            ||||||||||||||||||||::.||||||:||||:||.:|||||||.|||:||.||:|||||||.
Mouse     3 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKDMVSKLKK 67

  Fly    69 PRKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLLFVGSGVSGGE 133
            ||:|:||||||.||||||::|||||..||:|||||||||:||:|||.:|...|:|||||||||||
Mouse    68 PRRVILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE 132

  Fly   134 EGARHGPSLMPGGHEAAWPLIQPIFQAICAK-ADGEPCCEWVGDGGAGHFVKMVHNGIEYGDMQL 197
            ||||:||||||||::.|||.|:.|||||.|| ..|||||:||||.||||||||||||||||||||
Mouse   133 EGARYGPSLMPGGNKEAWPHIKAIFQAIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQL 197

  Fly   198 ICEAYHIMQS-LGLSADQMADEFGKWNSAELDSFLIEITRDILKYKDGKG-YLLERIRDTAGQKG 260
            ||||||:|:. ||:..::||..|.:||..||||||||||.:||||:|..| .||.:|||:|||||
Mouse   198 ICEAYHLMKDVLGMRHEEMAQAFEEWNKTELDSFLIEITANILKYRDTDGKELLPKIRDSAGQKG 262

  Fly   261 TGKWTAIAALQYGVPVTLIGEAVFSRCLSALKDERVQASSVLKGPSTKAQVANLTKFLDDIKHAL 325
            |||||||:||:||:||||||||||:||||:||:||||||..||||.......:...||:||:.||
Mouse   263 TGKWTAISALEYGMPVTLIGEAVFARCLSSLKEERVQASQKLKGPKVVQLEGSKKSFLEDIRKAL 327

  Fly   326 YCAKIVSYAQGFMLMREAARENKWRLNYGGIALMWRGGCIIRSVFLGNIKDAYTSQPELSNLLLD 390
            |.:||:||||||||:|:||.|..|.||||||||||||||||||||||.||||:...|||.|||||
Mouse   328 YASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFERNPELQNLLLD 392

  Fly   391 DFFKKAIERGQDSWREVVANAFRWGIPVPALSTALSFYDGYRTAKLPANLLQAQRDYFGAHTYEL 455
            ||||.|::..|||||.|::...:.|||:|..:||||||||||...|||||:||||||||||||||
Mouse   393 DFFKSAVDNCQDSWRRVISTGVQAGIPMPCFTTALSFYDGYRHEMLPANLIQAQRDYFGAHTYEL 457

  Fly   456 LGQEGQFHHTNWTGTGGNVSASTYQA 481
            |.:.|:|.||||||.||:||:|:|.|
Mouse   458 LTKPGEFIHTNWTGHGGSVSSSSYNA 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgdNP_476860.2 Gnd 3..467 CDD:440131 336/465 (72%)
PgdNP_001074743.1 Gnd 2..469 CDD:440131 339/468 (72%)

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