DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment D2hgdh and GulLO1

DIOPT Version :10

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_564393.1 Gene:GulLO1 / 840122 AraportID:AT1G32300 Length:595 Species:Arabidopsis thaliana


Alignment Length:428 Identity:89/428 - (20%)
Similarity:149/428 - (34%) Gaps:145/428 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 GYNICFLKRIRG--------NSKLVLKPGSTAEVAAILKYCNE--RRLAVVPQGGNTGLVGGSVP 155
            |.|:|.:....|        .:..|..|.:.||:.:|:.....  :::.||.:..:      |:|
plant    30 GNNMCTVTNSYGAFPDRSICEAAKVEYPKTEAELVSIVAAATRAGQKVRVVTRYVH------SIP 88

  Fly   156 --IC----DEIVLSLARLNKVLSVDEVTGIAVVEAGCILENFDQRAREVGLTVPLDLGAKASCH- 213
              :|    |.:::|...||.|:..:.......||:|..|......|.|:.|.:|         | 
plant    89 KLVCTDGKDGVLISTKFLNNVVGTNPEAKTLTVESGVTLRQLIGEAAELELALP---------HA 144

  Fly   214 -------IGGNVSTNAGGVRVVRYGNLHGSVLGVEAVLATGQVLDLMSNFKKDNTGY----HMKH 267
                   :||.:.|.|           |||.|..:.    ..|.|.:|..:..:.|.    ::|.
plant   145 PYWWGLTVGGLMGTGA-----------HGSSLWGKG----SAVHDYVSEIRMVSPGLASDGYVKV 194

  Fly   268 LFIG-------------SEGTLGVVTKLS-MLCPHSSRAVNVAFIGLNSFDDVLKTFVSAKRNLG 318
            ..:.             |.|.|||::::: .|.|...|::.......:.|.|...|| ..|....
plant   195 RVLSETIDPDEFRAAKVSLGVLGVISQVTFQLQPMFKRSLTFVMQNDSDFGDQAVTF-GEKHEFA 258

  Fly   319 EIL---SSCELI---DERA-LNTALEQFKFLNSPISGFPF-----------YMLIETSGSNGDHD 365
            :.|   |..:::   |:|. :||:      .|.....|||           ..|.|:..|:||.:
plant   259 DFLWLPSQGKVVYRMDDRVPVNTS------GNGLFDFFPFRPQLSVALAIIRSLEESEESSGDAN 317

  Fly   366 E-----EKINQFI--------GDGME-------------------RGEIQDGTVTGDPGKVQEIW 398
            :     |:|..|:        .:|||                   ....|||.:|..|      |
plant   318 DKCARAEQITSFLFSISYGVTNNGMEFTGYPVIGKQNHMMSSGTCLDSHQDGLITSCP------W 376

  Fly   399 KIREMVPLGLIEKSFCFKYDISLPL---RDFYNIVDVM 433
            ..|       |:..|..:...|:||   :.|.|.:..:
plant   377 DPR-------IKGQFFHQTAFSIPLTRVKGFINDIKAL 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 77..533 CDD:440046 89/428 (21%)
GulLO1NP_564393.1 pln_FAD_oxido 20..574 CDD:273750 89/428 (21%)

Return to query results.
Submit another query.