DRSC/TRiP Functional Genomics Resources

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Protein Alignment D2hgdh and GLDH

DIOPT Version :10

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_190376.1 Gene:GLDH / 823948 AraportID:AT3G47930 Length:610 Species:Arabidopsis thaliana


Alignment Length:647 Identity:123/647 - (19%)
Similarity:212/647 - (32%) Gaps:212/647 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RRLASAGATTLMRRPITTTTITTTSRTALAATYPAFATTVRTMAGSGA------PIPELTEITDN 68
            |.|.:.|.|.....|...........||..|.:..:|........||.      |.||..: ...
plant    33 RTLCTTGQTLTPPPPPPPRPPPPPPATASEAQFRKYAGYAALAIFSGVATYFSFPFPENAK-HKK 96

  Fly    69 VQRGNYATLTDKDVAHFEQLLGKNFVLTEDLEGYNICFLKRIRGNSKLVLKPGSTAEVAAILKYC 133
            .|...||.|.: |:.......|.:.|.|.:..                  :|.:.|::.|::|..
plant    97 AQIFRYAPLPE-DLHTVSNWSGTHEVQTRNFN------------------QPENLADLEALVKES 142

  Fly   134 NERRLAVVPQGGNTGLVGGSVPICDEIVLSLARLNKVLSVDEVTGIAVVEAGCILENFDQRAREV 198
            :|::|.:.|.|  :||....:.:....:::||.::|||.||:......|:||..::......::.
plant   143 HEKKLRIRPVG--SGLSPNGIGLSRSGMVNLALMDKVLEVDKEKKRVTVQAGIRVQQLVDAIKDY 205

  Fly   199 GLTVPLDLGAKASCHIGGNVSTNAGGVRVVRYGNLHGSVLGVEAVLATGQVLDLMSNFKKDNTGY 263
            |||:. :..:.....|||.:...|.|.. .|...:...|:.::.|......::|  :.:||...:
plant   206 GLTLQ-NFASIREQQIGGIIQVGAHGTG-ARLPPIDEQVISMKLVTPAKGTIEL--SREKDPELF 266

  Fly   264 HMKHLFIGSEGTLGVVTKLSMLCPHSSRAVNVAFIGLNSFDDVLKTFVSAKRNLGEILSSCELID 328
            |:....:|.   ||||.::::.|......|.             .|:||   ||.||..     :
plant   267 HLARCGLGG---LGVVAEVTLQCVARHELVE-------------HTYVS---NLQEIKK-----N 307

  Fly   329 ERALNTALEQFKFLNSPI---------------SGFP------------------------FYML 354
            .:.|.:|.:..|:|..|.               ||.|                        .|.:
plant   308 HKKLLSANKHVKYLYIPYTDTVVVVTCNPVSKWSGPPKDKPKYTTDEAVQHVRDLYRESIVKYRV 372

  Fly   355 IETSGSNGDHDEEKINQFIGDGMERGEIQDGTVTGDP------GKVQ----EIWKIREMVPLGLI 409
            .::...:.|..|..|.:     :...|::|..:..||      .||.    |.||..|...:|..
plant   373 QDSGKKSPDSSEPDIQE-----LSFTELRDKLLALDPLNDVHVAKVNQAEAEFWKKSEGYRVGWS 432

  Fly   410 EKSFCFKYDISLPLRDFYNIVDV-----MRERCGPLATVVCGYGHLGDSNLHLNVSCE--EFNGE 467
            ::...|               |.     :.|.|.|..|:.             |.|.:  |:..|
plant   433 DEILGF---------------DCGGQQWVSESCFPAGTLA-------------NPSMKDLEYIEE 469

  Fly   468 IYKRVE--------PFVYEYTSKLKGSISAEHG---------IGFL----------KKD------ 499
            :.|.:|        |....:|::.|..||....         :|.:          :||      
plant   470 LKKLIEKEAIPAPAPIEQRWTARSKSPISPAFSTSEDDIFSWVGIIMYLPTADPRQRKDITDEFF 534

  Fly   500 ----------------YLHYSKDPV------------------AIGYMREMKKLLDPNSILN 527
                            |.|::|..:                  .:....:.::.||||.||:
plant   535 HYRHLTQKQLWDQFSAYEHWAKIEIPKDKEELEALQARIRKRFPVDAYNKARRELDPNRILS 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 77..533 CDD:440046 106/574 (18%)
GLDHNP_190376.1 GLDHase 62..604 CDD:130737 116/618 (19%)

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