DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment D2hgdh and CKX1

DIOPT Version :10

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_181682.2 Gene:CKX1 / 818749 AraportID:AT2G41510 Length:637 Species:Arabidopsis thaliana


Alignment Length:349 Identity:67/349 - (19%)
Similarity:130/349 - (37%) Gaps:78/349 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IPELTEITDNVQRGNYATLTDKDVAHFEQLLGKNFVLTEDLEGY-------NIC--FLKRIRGNS 114
            ||..|.:.     .|::..|.|::........::.:::.|||||       |:.  |..|.:...
plant    91 IPGRTNLC-----SNHSVSTPKELPSSNPSDIRSSLVSLDLEGYISFDDVHNVAKDFGNRYQLPP 150

  Fly   115 KLVLKPGSTAEVAAILKYC----NERRLAVVPQGGNTGLVGGSVPICDEIVLSLARLNKVLSVDE 175
            ..:|.|.|..::::::|:.    :...|.|..:|....|.|          .:||....|:.::.
plant   151 LAILHPRSVFDISSMMKHIVHLGSTSNLTVAARGHGHSLQG----------QALAHQGVVIKMES 205

  Fly   176 VTGIAV-----------VEAGCILENFDQRAREVGLTVPLDLGAKASCHIGGNVSTNAG-GVRVV 228
            :....:           |..|.|..|..:...:.||: |..........:||.:| ||| ..:..
plant   206 LRSPDIRIYKGKQPYVDVSGGEIWINILRETLKYGLS-PKSWTDYLHLTVGGTLS-NAGISGQAF 268

  Fly   229 RYGNLHGSVLGVEAVLATGQVLDLMSNFKKDNTGYHMKHLF---IGSEGTLGVVTKLSML---CP 287
            ::|....:|..:|.|...|:|:...   :|.|:     .||   :|..|..|::|:..:.   .|
plant   269 KHGPQINNVYQLEIVTGKGEVVTCS---EKRNS-----ELFFSVLGGLGQFGIITRARISLEPAP 325

  Fly   288 HSSRAVNVAFIGLNSFDDVLKTFVSAKRNLGEILSSCELIDERALNTALEQFKFLNSPISGFPFY 352
            |..:.:.|.:...::|....:..:|.::....:                |.|..:|..      .
plant   326 HMVKWIRVLYSDFSAFSRDQEYLISKEKTFDYV----------------EGFVIINRT------D 368

  Fly   353 MLIETSGSNGDHDEEKINQFIGDG 376
            :|.....|...:|..:.::|..||
plant   369 LLNNWRSSFSPNDSTQASRFKSDG 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 77..533 CDD:440046 63/331 (19%)
CKX1NP_181682.2 PLN02441 73..605 CDD:215242 67/349 (19%)

Return to query results.
Submit another query.