DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment D2hgdh and CKX2

DIOPT Version :10

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_565455.1 Gene:CKX2 / 816469 AraportID:AT2G19500 Length:501 Species:Arabidopsis thaliana


Alignment Length:488 Identity:89/488 - (18%)
Similarity:180/488 - (36%) Gaps:127/488 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VLKPGSTAEVAAILKY-CNERRLAVVPQGGNTGLVGGSVPICDEIVLSLARLNKVLSVDEVTGIA 180
            |:.|.|||:::.:|:| .|.:....|...|....:.|...:...:::::..:..|: |.:....|
plant    60 VICPSSTADISRLLQYAANGKSTFQVAARGQGHSLNGQASVSGGVIVNMTCITDVV-VSKDKKYA 123

  Fly   181 VVEAGCILENFDQRAREVGLTVPLDLGAKASCHIGGNVSTNAGGVRVVRYGNLHGSVLGVEAVLA 245
            .|.||.:..:..::..|.|:: |:.........:||.:|....|.:|.|.|.|..:||.::.:..
plant   124 DVAAGTLWVDVLKKTAEKGVS-PVSWTDYLHITVGGTLSNGGIGGQVFRNGPLVSNVLELDVITG 187

  Fly   246 TGQVLDLMSNFKKDNTGYHMKHLF---IGSEGTLGVVTKLSMLCPHSSRAV---NVAFIGLNSFD 304
            .|::|........:        ||   :|..|..|::|:..::..|:.:..   .:.:....:|.
plant   188 KGEMLTCSRQLNPE--------LFYGVLGGLGQFGIITRARIVLDHAPKRAKWFRMLYSDFTTFT 244

  Fly   305 DVLKTFVSAKRNL------GEILSS-----------------CELIDERALNTALEQFKFLNSPI 346
            ...:..:|...::      |:|..|                 .:|:.:..:...||..|:.:.| 
plant   245 KDQERLISMANDIGVDYLEGQIFLSNGVVDTSFFPPSDQSKVADLVKQHGIIYVLEVAKYYDDP- 308

  Fly   347 SGFPFY-MLIET--------SGSNGDHDEEKINQFIGDGMERGEIQDGTVTGDPGKVQEIWKIRE 402
             ..|.. .:|:|        .|....||   :..|  |.:.|..:::.             |:|.
plant   309 -NLPIISKVIDTLTKTLSYLPGFISMHD---VAYF--DFLNRVHVEEN-------------KLRS 354

  Fly   403 MVPLGLIEKSFCFKYDISLP---LRDFYN--IVDVM--RERCGPLATVVCGYGHLGDSNLHLNV- 459
               |||.|....: .::.:|   :.||:|  :.|::  ::....||.:.....:..|:.:...: 
plant   355 ---LGLWELPHPW-LNLYVPKSRILDFHNGVVKDILLKQKSASGLALLYPTNRNKWDNRMSAMIP 415

  Fly   460 ----------------------SCEEFNGEIYK-------RVEPFVYEYTSKLKGSISAEHGIGF 495
                                  ..|..|.:|.:       :::.::..||||       |..|..
plant   416 EIDEDVIYIIGLLQSATPKDLPEVESVNEKIIRFCKDSGIKIKQYLMHYTSK-------EDWIEH 473

  Fly   496 LKKDYLHYSKDPVAIGYMREMKKLLDPNSILNP 528
            ....:..:||          .|.|.||..:|:|
plant   474 FGSKWDDFSK----------RKDLFDPKKLLSP 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 77..533 CDD:440046 89/488 (18%)
CKX2NP_565455.1 PLN02441 1..501 CDD:215242 89/488 (18%)

Return to query results.
Submit another query.