DRSC/TRiP Functional Genomics Resources

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Protein Alignment D2hgdh and ldhd

DIOPT Version :10

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_956167.1 Gene:ldhd / 334208 ZFINID:ZDB-GENE-030131-6140 Length:497 Species:Danio rerio


Alignment Length:440 Identity:125/440 - (28%)
Similarity:207/440 - (47%) Gaps:46/440 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LVLKPGSTAEVAAILKYCNERRLAVVPQGGNTGLVGGSVPICDEIVLSLARLNKVLSVDEVTGIA 180
            :|:.|.|..||:|:.|.|:..||.::|.|..|||.||...:...:..||.::.:|:.:.:.....
Zfish    72 VVVFPRSVEEVSALAKICHHYRLPIIPFGTGTGLEGGVSALQGGVCFSLRKMEQVVDLHQEDFDV 136

  Fly   181 VVEAGCILENFDQRAREVGLTVPLDLGAKASCHIGGNVSTNAGGVRVVRYGNLHGSVLGVEAVLA 245
            .||.|...::.:...|:.||..|:|.||.||  :.|..:|:|.|...||||.:..:||.:|.|||
Zfish   137 TVEPGVTRKSLNSYLRDTGLWFPVDPGADAS--LCGMAATSASGTNAVRYGTMRENVLNLEVVLA 199

  Fly   246 TGQVLDLMSNF---KKDNTGYHMKHLFIGSEGTLGVVTKLSML---CPHSSRAVNVAFIGLNSFD 304
            .|.:|......   :|...||::.:||:|||||||::||.::.   .|.|..:...:|..:.|..
Zfish   200 DGTILHTAGKGRRPRKTAAGYNLTNLFVGSEGTLGIITKATLRLYGVPESMVSAVCSFPSVQSAV 264

  Fly   305 DVLKTFVSAKRNLGEILSSCELIDERALNTALEQFKFLNSPISGFPFYMLIETSGSNGDHDE--- 366
            |.....:.|    |..::..|.:|:..:| |..:|..|:..::...|   :|..||:...:|   
Zfish   265 DSTVQILQA----GVPIARIEFLDDVMIN-ACNRFNNLSYAVTPTLF---LEFHGSSKSMEEQVS 321

  Fly   367 --EKINQFIGDGMERGEIQDGTVTGDPGKVQEIWKIRE---MVPLGLIEKSFCFKYDISLPLRDF 426
              |:|.:..|.       .|.....|......:||.|.   ...:.|......:..|:.:|:...
Zfish   322 VTEEITRDNGG-------SDFAWAEDEETRSRLWKARHDAWYAAMALRPGCKAYSTDVCVPISRL 379

  Fly   427 YNIV-----DVMRER-CGPLATVVCGYGHLGDSNLHLNVSCEEFNGEIYKRVEPFVYEYTSK--- 482
            ..|:     |::... .||:|      ||:||.|.|..:..:..:.:..:||..|......:   
Zfish   380 PQIIVETKADLISNNITGPIA------GHVGDGNFHCLIVLDPNDPDEVQRVHSFTERLARRALA 438

  Fly   483 LKGSISAEHGIGFLKKDYLHYSKDPVAIGYMREMKKLLDPNSILNPYKVL 532
            :.|:.:.|||||..|:..|.....|:||..|:.:|..|||.:::||.|:|
Zfish   439 MDGTCTGEHGIGLGKRALLREELGPLAIEVMKGLKASLDPRNLMNPGKLL 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 77..533 CDD:440046 125/440 (28%)
ldhdNP_956167.1 GlcD 45..488 CDD:440046 124/438 (28%)

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