DRSC/TRiP Functional Genomics Resources

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Protein Alignment D2hgdh and Gulo

DIOPT Version :9

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_848862.1 Gene:Gulo / 268756 MGIID:1353434 Length:440 Species:Mus musculus


Alignment Length:236 Identity:57/236 - (24%)
Similarity:99/236 - (41%) Gaps:36/236 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 KLVLKPGSTAEVAAILKYCNERRLAVVPQGGNTGLVGGSVPICDEIVLSLARLNKVLSVDEVTGI 179
            ::..:|.|..||..:|....::...|...||  |.....:...|..::.:.::|:||.||:....
Mouse    22 EMYYQPTSVGEVREVLALARQQNKKVKVVGG--GHSPSDIACTDGFMIHMGKMNRVLQVDKEKKQ 84

  Fly   180 AVVEAGCILENFDQRAREVGLTVPLDLGAKASCHIGGNVST---NAGGVRVVRYGNLHGSVLGVE 241
            ..||||.:|.:...:..:.||.:. :|||.:...:||.:.:   |.|    :::|.|...|:.:.
Mouse    85 VTVEAGILLTDLHPQLDKHGLALS-NLGAVSDVTVGGVIGSGTHNTG----IKHGILATQVVALT 144

  Fly   242 AVLATGQVLDLMSNFKKDNTGYHMKHLFIGSEGTLGVVTKLSMLCPHSSRAVNVAFIGLNSFDDV 306
            .:.|.|.||:...:...|.......||     |.|||:..:::.|......:.      .||...
Mouse   145 LMKADGTVLECSESSNADVFQAARVHL-----GCLGVILTVTLQCVPQFHLLE------TSFPST 198

  Fly   307 LKTFVSAKRNLGEILSSCELIDERALNTALEQFKFLNSPIS 347
            ||          |:|.:   :|.....:  |.|:||..|.|
Mouse   199 LK----------EVLDN---LDSHLKKS--EYFRFLWFPHS 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 85..532 CDD:223354 57/236 (24%)
FAD_binding_4 115..252 CDD:279851 36/139 (26%)
FAD-oxidase_C 291..531 CDD:280983 13/57 (23%)
GuloNP_848862.1 FAD_lactone_ox 7..433 CDD:273751 57/236 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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