DRSC/TRiP Functional Genomics Resources

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Protein Alignment D2hgdh and SPBC713.03

DIOPT Version :9

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_595342.1 Gene:SPBC713.03 / 2541151 PomBaseID:SPBC713.03 Length:526 Species:Schizosaccharomyces pombe


Alignment Length:483 Identity:219/483 - (45%)
Similarity:323/483 - (66%) Gaps:32/483 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 YATLTDKDVAHFEQLLGKNFVLTE---------DLEGYNICFLKRIRGNSKLVLKPGSTAEVAAI 129
            ||.|:::||..|:.::||:..|.:         ||:.:||.::.:.||.::|.|||.:|.:|:.|
pombe    48 YAKLSEQDVQVFKSIIGKDGSLIDGLDKSTDPADLDAFNIDWMNKYRGKTQLALKPKTTQQVSEI 112

  Fly   130 LKYCNERRLAVVPQGGNTGLVGGSVPICDEIVLSLARLNKVLSVDEVTGIAVVEAGCILENFDQR 194
            |||||:::||||||||||||||||||:.|||||:|..:|::.:.||::|:..:::|.||||.|..
pombe   113 LKYCNQKKLAVVPQGGNTGLVGGSVPVFDEIVLNLGLMNQIHTFDEISGVITLDSGVILENADNF 177

  Fly   195 AREVGLTVPLDLGAKASCHIGGNVSTNAGGVRVVRYGNLHGSVLGVEAVLATGQVLDLMSNFKKD 259
            ..|.|...|||||||.||.:||..:|.|||:|::|||:||||:||:||||..|.:||.:...:||
pombe   178 LAEKGYMFPLDLGAKGSCQVGGCAATAAGGLRLLRYGSLHGSILGMEAVLPDGTILDNLVTLRKD 242

  Fly   260 NTGYHMKHLFIGSEGTLGVVTKLSMLCPHSSRAVNVAFIGLNSFDDVLKTFVSAKRNLGEILSSC 324
            |||..:|.|||||||.|||:||||::||....:.||||.|:.|:::|||.|...:.:|.||||:.
pombe   243 NTGLDIKQLFIGSEGYLGVITKLSVICPKRPSSTNVAFFGVPSYENVLKAFSETRSHLTEILSAF 307

  Fly   325 ELIDERALNTALEQFKFLNSPISG-FPFYMLIETSGSNGDHDEEKINQFIGDGMERGEIQDGTVT 388
            ||:|..: .|.::::.....|:.. .|||:|:||.|||.:|||:||...:.|.:|:..|.||.:.
pombe   308 ELMDNTS-QTLVDKYSGTQRPLEDEHPFYVLVETQGSNKEHDEQKITALVEDLLEKEIISDGVLA 371

  Fly   389 GDPGKVQEIWKIREMVPLGLIE-----KSFCFKYDISLPLRDFYNIVDVMRERC----------- 437
            .|..:::.:|:.||    |:.|     .|..:|||:||||...|::|:..::|.           
pombe   372 QDESQLRVLWERRE----GITECLAKAGSGVYKYDVSLPLPVLYDLVNDTKKRLIEFNLLDDTPE 432

  Fly   438 GPLATVVCGYGHLGDSNLHLNVSCEEFNGEIYKRVEPFVYEYTSKLKGSISAEHGIGFLKKDYLH 502
            .|:..|| |:||:||.|||||::..:|:..:.|.:||:|||:.|:.:||||||||:|.|||.::.
pombe   433 HPVIDVV-GFGHMGDGNLHLNIAVRQFDKRVEKCLEPWVYEWVSRHRGSISAEHGLGLLKKPFVG 496

  Fly   503 YSKDPVAIGYMREMKKLLDPNSILNPYK 530
            |||....|..|:.:|.:.|||.|:.|||
pombe   497 YSKSKEMIHLMKTLKNVFDPNGIMLPYK 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 85..532 CDD:223354 214/472 (45%)
FAD_binding_4 115..252 CDD:279851 79/136 (58%)
FAD-oxidase_C 291..531 CDD:280983 102/257 (40%)
SPBC713.03NP_595342.1 GlcD 59..526 CDD:223354 214/472 (45%)
FAD_binding_4 98..234 CDD:279851 78/135 (58%)
FAD-oxidase_C 272..525 CDD:280983 102/259 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I749
eggNOG 1 0.900 - - E1_COG0277
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5534
Inparanoid 1 1.050 423 1.000 Inparanoid score I342
OMA 1 1.010 - - QHG62883
OrthoFinder 1 1.000 - - FOG0003549
OrthoInspector 1 1.000 - - oto101479
orthoMCL 1 0.900 - - OOG6_100306
Panther 1 1.100 - - LDO PTHR43716
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1958
SonicParanoid 1 1.000 - - X2425
TreeFam 1 0.960 - -
1413.860

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