DRSC/TRiP Functional Genomics Resources

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Protein Alignment D2hgdh and F32D8.12

DIOPT Version :9

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001379315.1 Gene:F32D8.12 / 179506 WormBaseID:WBGene00009334 Length:474 Species:Caenorhabditis elegans


Alignment Length:494 Identity:139/494 - (28%)
Similarity:224/494 - (45%) Gaps:71/494 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 TLTDKDVAHFEQLLGKNFVLTEDLEGYNICFLKR----IRGNSKLVLKPGSTAEVAAILKYCNER 136
            |..:|.:...::::|.:.|.|:  |.....|.:.    |.....:||:|.:..:|:.|||.||:|
 Worm    12 TAIEKSLPDLQKIVGNSSVRTQ--ESVRRQFARDESHFIAPPPAVVLEPTNVEQVSEILKLCNDR 74

  Fly   137 RLAVVPQGGNTGLVGGSVPICDEIVLS---------LARLNKVLSV-DEVTGIAVVEAGCILENF 191
            .:.|||.|..|||.|||:.....|.:|         |...:.|.|| ...|.||:.:|       
 Worm    75 AIPVVPFGTGTGLEGGSMSTLGGICISTQQIIGDPVLREQDFVCSVKPSTTRIALNDA------- 132

  Fly   192 DQRAREVGLTVPLDLGAKASCHIGGNVSTNAGGVRVVRYGNLHGSVLGVEAVLATGQVLDLMSNF 256
               .:..||..|:|.||.||  :.|.|:|:|.|...:|||.:..:|:.:|.|||.|.::|.....
 Worm   133 ---IKNSGLFFPVDPGADAS--VCGMVATSASGTNAIRYGTMKENVVNLEVVLADGTIIDTKGKG 192

  Fly   257 ---KKDNTGYHMKHLFIGSEGTLGVVTKLSMLCPHSSRAVNVAFIGLNSFDDVLKTFVSAKRNLG 318
               :|.:.|::...||:|||||||::|:.::......:.::.|.....:..:...|.|       
 Worm   193 RCPRKSSAGFNFTELFVGSEGTLGIITEATVKVHPRPQFLSAAVCSFPTVHEAASTVV------- 250

  Fly   319 EIL------SSCELIDERALNTALEQFKFLN---SPISGFPFYMLIETSGSNGDHDEEKINQ--F 372
            |:|      :..||:|...:. |...:..||   ||.      :.||..|||   ::|..:|  .
 Worm   251 EVLQWNIPVARIELLDTVQIQ-ACNSYSSLNLRESPT------LFIEFHGSN---EKEVADQTSA 305

  Fly   373 IGDGMERGEIQDGTVTGDPGKVQEIWKIRE---MVPLGLIEKSFCFKYDISLPLRDFYNIVDVMR 434
            :.|..:..|..|......|.|...:||.|.   ...|.:...:..|..|:.:|:....:::...|
 Worm   306 VEDICKSHEALDFDSGASPDKRATLWKARHNAYYAALAMRTGARGFTTDVCVPISKLADVISETR 370

  Fly   435 ERCGP---LATVVCGYGHLGDSNLHLNVSCEEFNGEIYKRVEPF---VYEYTSKLKGSISAEHGI 493
            .....   |.|||   ||:||.|.|:.:...|.:...:::::.|   :........|:.:.||||
 Worm   371 SDLDEHEILGTVV---GHVGDGNFHVILPTIEEDKTEHRKIQSFSDRLVRRALAADGTCTGEHGI 432

  Fly   494 GFLKKDYLHYSKDPVAIGYMREMKKLLDPNSILNPYKVL 532
            |..|:.||........:..|..:|..||||:|:||.|||
 Worm   433 GLGKRKYLREELGENTVRLMHTIKHALDPNNIMNPGKVL 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 85..532 CDD:223354 135/483 (28%)
FAD_binding_4 115..252 CDD:279851 52/146 (36%)
FAD-oxidase_C 291..531 CDD:280983 63/259 (24%)
F32D8.12NP_001379315.1 PLN02805 <43..472 CDD:178402 132/461 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216115at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100306
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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