DRSC/TRiP Functional Genomics Resources

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Protein Alignment D2hgdh and ads-1

DIOPT Version :9

Sequence 1:NP_569982.1 Gene:D2hgdh / 31184 FlyBaseID:FBgn0023507 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_497185.1 Gene:ads-1 / 175192 WormBaseID:WBGene00000081 Length:597 Species:Caenorhabditis elegans


Alignment Length:529 Identity:115/529 - (21%)
Similarity:211/529 - (39%) Gaps:110/529 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VRTMAGSGAPIPELTEITDNVQRGNYATLTDKDVAHFEQLLGKNFVLTEDLEGYNICFLKRIRGN 113
            :|.|.|.|..:.::.    |::.|....|.|                                  
 Worm   110 IRLMRGHGHTVHDMI----NLREGKIPRLPD---------------------------------- 136

  Fly   114 SKLVLKPGSTAEVAAILKYCNERRLAVVPQGGNTGLVGG-SVPICDE---IVLSLARLNKVLSVD 174
              :|:.|.|..|:..|::.......|::|.||.|.:... ..|..::   |.:.:|.|:|:|.:|
 Worm   137 --IVVWPKSEHEIVKIIEGAMSHNCAIIPIGGGTSVTNALDTPETEKRAVISMDMALLDKILWID 199

  Fly   175 EVTGIAVVEAGCILENFDQRAREVGLTVPLDLGAKASCHIGGNVSTNAGGVRVVRYGNLHGSVLG 239
            ........:||.:.::.:::..:.|.|...:..:.....:||.|||.|.|::..:|||:...|:.
 Worm   200 RENLTCRAQAGIVGQSLERQLNKKGFTCGHEPDSIEFSTLGGWVSTRASGMKKNKYGNIEDLVVH 264

  Fly   240 VEAVLATGQVLDLMSNFKKDNTGYHMKHLFIGSEGTLGVVTKLSML---CPHSSRAVNVAF---- 297
            :..|...| ::.......:.::|..:..:.:|||||||||:::::.   .|...|..:..|    
 Worm   265 LNFVCPKG-IIQKQCQVPRMSSGPDIHQIILGSEGTLGVVSEVTIKIFPIPEVKRFGSFVFPNFE 328

  Fly   298 IGLNSFDDV-LKTFVSAKRNLGEILSSCELIDERALNTALEQ-FKFLNSPIS--------GFPF- 351
            .|:|.|.:| ::....|...|   :.:.:.:..:||..|.:. :..|.|.:|        ||.. 
 Worm   329 SGVNFFREVAIQRCQPASLRL---MDNDQFVMGQALKVASDSWWADLKSSVSKMYITSWKGFKVD 390

  Fly   352 -----YMLIETSGSNGDHDEEKIN----QFIGDGMERGEIQDGTVTGDPGKVQEIWKIREMVPLG 407
                 ..:.|.:....|..||::|    ||.|       :..|...|..| .:..:.|..:..||
 Worm   391 EICAATCVYEGNREEVDQHEERLNKLAEQFHG-------VVGGAENGQYG-YRLTFAIAYLRDLG 447

  Fly   408 LIEKSFCFKYDISLP----LRDFYNIVDVMRERC---GPLATVV-------------CGYGHLGD 452
            :........::.|:|    |....|:.::|:...   |....|:             |.|.:.|.
 Worm   448 MNHGVLGESFETSVPWDKVLSLCRNVKELMKREAKAQGVTHPVLANCRVTQVYDAGACVYFYFGF 512

  Fly   453 SNLHLNVSCEEFNG-EIYKRVEPFVYEYTSKLKGSISAEHGIGFLKKDYLHYSKDPVAIGYMREM 516
            :...|.      || |:|.|:|....:......||||..||:|.::|.::..:...|.|..::.:
 Worm   513 NARGLK------NGLEVYDRIETAARDEIIACGGSISHHHGVGKIRKQWMLTTNGAVGIALLKAI 571

  Fly   517 KKLLDPNSI 525
            |..|||.:|
 Worm   572 KSELDPANI 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D2hgdhNP_569982.1 GlcD 85..532 CDD:223354 107/493 (22%)
FAD_binding_4 115..252 CDD:279851 34/140 (24%)
FAD-oxidase_C 291..531 CDD:280983 62/280 (22%)
ads-1NP_497185.1 GlcD 92..581 CDD:223354 115/529 (22%)
FAD_binding_4 135..276 CDD:279851 35/177 (20%)
FAD-oxidase_C 313..581 CDD:280983 63/285 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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