DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ph-p and CG2662

DIOPT Version :9

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:NP_001284832.1 Gene:CG2662 / 31254 FlyBaseID:FBgn0024993 Length:446 Species:Drosophila melanogaster


Alignment Length:495 Identity:103/495 - (20%)
Similarity:158/495 - (31%) Gaps:185/495 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  1202 SKQSNAAVQPPSSTTPNSVSGKEEPKLATCGSLTSATSTSTTTTITNGIGVARTTASTAVSTAST 1266
            ||..:....|...||.||.:|                        :||    ....|..|:||..
  Fly     4 SKDEDKEESPVQPTTHNSSAG------------------------SNG----HDAKSPVVTTAPA 40

  Fly  1267 TTTSSGTFITSCTSTTTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQEAN-----EPFPVTR 1326
            .|.|......|....:..||..:..     ||.:..|:      |.::.:.::     ...|.|.
  Fly    41 ATCSVSVSDASGAGASVRTTGRVKK-----PKQVYDPS------DNYVSRASSNRNSLSSVPATS 94

  Fly  1327 QRYADKDVSDEPPKKKATMQEDIKLSGIA---------SAPGSDMVACEQCGKME------HKA- 1375
            .       ...||.|:||..:|...|.::         :|...:...|::|||.|      ||: 
  Fly    95 N-------VQSPPVKEATDSQDSTTSPVSEQQQQQLQQAAQLRNFDTCQKCGKSEPKRGSGHKSN 152

  Fly  1376 ------------------------------KLKRKRYC------SPG---CS------------- 1388
                                          |..:.|||      .||   ||             
  Fly   153 FLTCKGCMQKWHFPCLPITFHNQSTARKKFKCDKCRYCRLCNVRGPGLSICSLCVDAYHPDCNDP 217

  Fly  1389 --RQAKN---------------GIGG---VGSGETNGLGTGGIVGVD-AMALVDRLDEAMAEEKM 1432
              :|:|.               .|||   ..|.|..|.........| |..:|.|...|..::::
  Fly   218 TLKQSKAVEANPNWRCFRCEACNIGGSTSASSEEQTGARKSTASREDQAQPVVPRKSNAGRKKRV 282

  Fly  1433 QTEAT----------------PKLSESFPILGASTEVPPMSLPVQAAISAP----------SPLA 1471
            |:|.|                |..:|.........:..|..:.|:.....|          :.|.
  Fly   283 QSEPTGQEKAAKIEKLAKRRQPLKTEKKKEYKKEEDEEPAQIKVKVEKVEPVDMETEQIENNDLP 347

  Fly  1472 MPLGSPLSVALPTLAPLSVVTSGAAPKSSEVNGTDRPPISSWSVDDVSNFI-RELPGCQDYVDDF 1535
            .|....||:   .|.|::.|...:            .|:|:|||:.|..|: :..|   ...:.|
  Fly   348 GPEQESLSL---RLTPITAVERRS------------HPVSTWSVEQVVQFVAKRYP---KEANVF 394

  Fly  1536 IQQEIDGQALLLLKEKHLVNAMGMKLGPALKIVAKVESIK 1575
            ..|:|||.:||||....::|..|:||||||::...|.|::
  Fly   395 RYQDIDGASLLLLNRHDVMNGFGLKLGPALRVFELVMSLQ 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 SAM_Ph1,2,3 1508..1576 CDD:188976 27/69 (39%)
SAM 1511..1576 CDD:197735 26/66 (39%)
CG2662NP_001284832.1 PHD 134..187 CDD:214584 8/52 (15%)
PHD 189..236 CDD:214584 8/46 (17%)
SAM_Atherin-like 371..438 CDD:188982 26/67 (39%)
SAM 371..436 CDD:197735 26/67 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.