DRSC/TRiP Functional Genomics Resources

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Protein Alignment ph-p and L3mbtl1

DIOPT Version :9

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:XP_017447769.1 Gene:L3mbtl1 / 311613 RGDID:1307316 Length:884 Species:Rattus norvegicus


Alignment Length:921 Identity:174/921 - (18%)
Similarity:259/921 - (28%) Gaps:363/921 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   955 QSGQLQLSSVPFSVSSSTTPAGIATSSALQAALSASGAIFQTAKPGTCSSSSPTSSVVTITNQSS 1019
            |:.||:.|..|...:........|..:.|..:|.|.|    ..:|...:.....|.:        
  Rat     4 QTRQLRSSEPPLQGTGPPPVCAGARRTRLPRSLGAGG----NRQPCRRNQMEGHSDM-------- 56

  Fly  1020 TPLVTSSTVASIQQAQTQSAQVHQHQQLISATIAGGTQQQPQGPPSLTPTTNPILAMTSMMNATV 1084
                  ..:.:::.:.|....||    |::...||       ..|.| |||..|:...:   ||:
  Rat    57 ------EIIRAVKGSATGEINVH----LVARDSAG-------SHPHL-PTTTFIIPTNA---ATL 100

  Fly  1085 GHLSTA-------PPVTVSVTSTAVTSSPGQLVLLSTASSGGGG------------SIPATPTKE 1130
            |..|||       .||.|........|.|....:|...|:|.|.            |.|...:..
  Rat   101 GLPSTALDVSYPREPVHVGAAERVAGSEPVTATILPQLSTGPGTNSTVRLLDWTGVSAPLAGSGM 165

  Fly  1131 TPSK-GP----------TATLVPIGSPKTP--------------VSGKDTCTTPKSSTPATVSAS 1170
            .||: ||          |..::.|..|::|              :...|....|:...|.  ..|
  Rat   166 RPSELGPASQFRINEYATQNMIEIERPRSPEQRHEGGTAGREADIQHPDVHKDPQEVIPQ--EPS 228

  Fly  1171 VEASS----------STGEALSNGDASDRSSTP---------SKGATT------PTSKQSNAAVQ 1210
            |:|.|          |.|  |..|.:.||...|         :.|.|.      |..|:.:...|
  Rat   229 VDAGSCKCQTCGPQQSIG--LDVGSSGDRCPQPFQKRSVIVENSGCTVASELIKPMKKRKHKEYQ 291

  Fly  1211 PPS------------------STTPNSVSGKE---------------------EPKLATCGSLTS 1236
            .||                  ..||.:...:|                     |.:.|....::.
  Rat   292 SPSEESEPEAMKQGKGKDPDREPTPGTSENEEWSRSQLVSSEKKEGWSWESYLEEQKAVTAPVSL 356

  Fly  1237 ATSTSTTTTITNGI-------GV---------ARTTASTA------------------VSTASTT 1267
            ...:...|...||.       ||         ..|.|...                  |:..|..
  Rat   357 FQDSQAVTHNKNGFKLGMKLEGVDPQHPSMYFVLTVAEVCGYRLRLHFDGYSECHDFWVNANSPD 421

  Fly  1268 TTSSGTF-----------------------ITSCTSTTTTTTSSISNGSKDLP---------KAM 1300
            ...:|.|                       :.|..:........:|......|         :|:
  Rat   422 IHPAGWFEKTGHKLQPPKGYKEEEFSWSQYLRSTKAQAAPKHLFVSQSHSPPPVGFQVGMKLEAV 486

  Fly  1301 IKPN--------VLTHVIDGFIIQ------------EANEPF------------PVT-RQRYADK 1332
            .:.|        |...|...|::.            :|:.|:            |:| .|.|.|.
  Rat   487 DRMNPSLVCVASVTDVVASRFLVHFDDWDDTYDYWCDASSPYIHPVGWCQKQGKPLTPPQDYPDP 551

  Fly  1333 D--------------------VSDEPPK-------------------KKATMQE----------- 1347
            |                    ....||.                   :.|::::           
  Rat   552 DSFCWEKYLEETGTSAVPTWAFKVRPPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKLHFD 616

  Fly  1348 ---------------DIKLSGIASAPG-----------SDMVACEQCGKMEHKAKLKRK------ 1380
                           ||..:|..|..|           |...:...|..:.|::....|      
  Rat   617 GWSHNYDFWIDADHPDIHPAGWCSKTGHPLEPPLRPRESSSASPGGCPPLSHRSPPHTKTSKYSF 681

  Fly  1381 --RYC-SPGCSRQAKNGIGGVGSGETNGLGTGGIVGVDAMALVDRLDEAMAEEKMQTEATPKLSE 1442
              |.| :|||.          |||...|..|.... :....|.:|....:..|...:|.|.:...
  Rat   682 HHRKCPTPGCD----------GSGHVTGKFTAHHC-LSGCPLAERNQSRLKAELSDSETTARKKN 735

  Fly  1443 SFPILGASTEVPPMSLP-VQAAISAPSPL-AMP----LGSPLSV--------ALPTLA--PLSVV 1491
                   .:.:.|...| .|..|..|... .||    ...|.||        .|||.|  ||||.
  Rat   736 -------QSNLSPRKKPRHQGRIGRPPKYRKMPDEDFQALPPSVVHQSLFMSTLPTHADRPLSVC 793

  Fly  1492 TSGAAPKSSEVNGTDRPPISSWSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLLLKEKHLVNA 1556
            ..........|.|.....:|.|::::|..|::.|.|.:|....|.::.|||:|.|||.:..:|..
  Rat   794 WEQHCKLLPGVAGISASAVSKWTIEEVFGFVQTLTGSEDQARLFKEEMIDGEAFLLLTQADIVKI 858

  Fly  1557 MGMKLGPALKI 1567
            |.:||||||||
  Rat   859 MSVKLGPALKI 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 SAM_Ph1,2,3 1508..1576 CDD:188976 25/60 (42%)
SAM 1511..1576 CDD:197735 25/57 (44%)
L3mbtl1XP_017447769.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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