DRSC/TRiP Functional Genomics Resources

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Protein Alignment ph-p and Samd7

DIOPT Version :9

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:NP_001178632.1 Gene:Samd7 / 310257 RGDID:1308931 Length:445 Species:Rattus norvegicus


Alignment Length:367 Identity:86/367 - (23%)
Similarity:124/367 - (33%) Gaps:120/367 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1315 IQEANEPFPVTRQRYADKDVSDEPPKKKATMQEDIKLSGIASAPGSDMVACEQCGKMEHKAKLKR 1379
            :..||.|.|:....|:...:....|.|..|.:.::.....|:....:|.:..|..:||       
  Rat    59 LPSANTPNPLPGHFYSGWGILPPEPIKAVTTRNEMFERHHAARAEMEMYSLYQQRRME------- 116

  Fly  1380 KRYCSPGCSRQAKNGIGGVGSGETNGLG-TGGIVGVDAMALVDRLD------------------- 1424
                     |....|:.|:|.....|.| .||..|....:.:...|                   
  Rat   117 ---------RVNPKGLSGLGIPLFYGSGCLGGPAGFQGRSTLPASDVHVHRSTFRHLQGNPVLLA 172

  Fly  1425 --------------------------------EAMAEEKM--QTEATPKLSESF---PILGASTE 1452
                                            ::.|:||.  |....|...|.:   |.:|...:
  Rat   173 TRPHFTECWGQKYRLRRGTVYQKPPEIDTESFKSQADEKSSGQMPTAPYEEEEYIKDPEIGVDNQ 237

  Fly  1453 VPPMSLPVQAAISAPSP---LAMPLGSPL-SVALPTLAPLSVVTSGAAPKSSE------------ 1501
            ..|       .::..:|   ||.|.|.|. :...|:.........|....|.:            
  Rat   238 QEP-------RVTDGNPTAVLANPHGEPQPNQRKPSSMEAKAWDDGKGEPSEQGYEGCDEKNGVC 295

  Fly  1502 -------VNGTDRP-------PIS---SWSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLLLK 1549
                   :.||..|       |:|   .|:||||.||||.||||.||...|....|||:.|.||.
  Rat   296 LPASTLPLPGTQEPVALQENRPLSDIHKWTVDDVYNFIRSLPGCSDYAQVFKDHAIDGETLPLLT 360

  Fly  1550 EKHLVNAMGMKLGPALKIVAKVES------IKEVPP-PGEAK 1584
            |:||...||:||||||||.::|..      .|::|. |..|:
  Rat   361 EQHLRGTMGLKLGPALKIQSQVSQHVGNMFCKKLPSLPSHAR 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 SAM_Ph1,2,3 1508..1576 CDD:188976 39/83 (47%)
SAM 1511..1576 CDD:197735 37/73 (51%)
Samd7NP_001178632.1 SAM_Samd7,11 321..388 CDD:188978 36/66 (55%)
SAM 322..384 CDD:197735 36/61 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12247
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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