DRSC/TRiP Functional Genomics Resources

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Protein Alignment ph-p and L3mbtl3

DIOPT Version :9

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:NP_001346183.1 Gene:L3mbtl3 / 237339 MGIID:2143628 Length:883 Species:Mus musculus


Alignment Length:294 Identity:69/294 - (23%)
Similarity:112/294 - (38%) Gaps:88/294 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1323 PVTRQRYADKDVSDEPPKKKATMQEDIKLSGIASAPGSDMVACEQCGKMEHKAKLKRKRYCSPGC 1387
            |.||:::|:....|...||    :.::|.|..|.....:.....|  :.:...::::.::..|  
Mouse   627 PETREKHANNFKEDSEKKK----ENEVKTSAEAKVVREEPTPSVQ--QSQPPQQVQQVQHAQP-- 683

  Fly  1388 SRQAKNGIGGVGSGETNGLGTGGIVGVDAMALVDRLDEA-MAEEKMQTEATPKLSESFPILGAST 1451
            .:||:                             :..:| .|::..|.:..|:..:        |
Mouse   684 PQQAQ-----------------------------KAPQAQQAQQAQQAQQAPQAPQ--------T 711

  Fly  1452 EVPPMSLPVQAAISAPS-------------PLAMPLGSPLSV--ALPTLAPLSVVTSGAAPKSSE 1501
            ..|..:..||.|..||.             ..|.|:..|..|  |.||  .....|...|.:.|.
Mouse   712 PQPQQAPQVQQAQQAPQAQQAQQPQQAQQPQQAPPVQQPQQVQQAQPT--QQQAQTQQQAQRRSA 774

  Fly  1502 VNGTDRPPI-------------------------SSWSVDDVSNFIRELPGCQDYVDDFIQQEID 1541
            |..:.:|||                         |.||.|:||.||:.||||:::...|..::||
Mouse   775 VFLSFKPPIPCLPLRWEQQSKLLPTVAGIPASRVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQID 839

  Fly  1542 GQALLLLKEKHLVNAMGMKLGPALKIVAKVESIK 1575
            |:|.||:.:..:|..|.:||||||||...:...|
Mouse   840 GEAFLLMTQTDIVKIMSIKLGPALKIFNSILMFK 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 SAM_Ph1,2,3 1508..1576 CDD:188976 33/93 (35%)
SAM 1511..1576 CDD:197735 30/65 (46%)
L3mbtl3NP_001346183.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..223
MBT 1 232..332
MBT 236..332 CDD:214723
MBT 2 340..439
MBT 343..439 CDD:214723
MBT 3 448..543
MBT 451..543 CDD:214723
zf-C2HC 558..586 CDD:366692
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 595..768 33/187 (18%)
SAM_Scm-like-3MBT3,4 808..873 CDD:188981 29/64 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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