DRSC/TRiP Functional Genomics Resources

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Protein Alignment ph-p and SAMD13

DIOPT Version :9

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:XP_016855866.1 Gene:SAMD13 / 148418 HGNCID:24582 Length:122 Species:Homo sapiens


Alignment Length:100 Identity:38/100 - (38%)
Similarity:57/100 - (56%) Gaps:12/100 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1469 PLAMPLGSPLSVALPTLAPLSVVTSGAAPKSSEVNGTDRPP-ISSWSVDDVSNFIRELPGCQDYV 1532
            |.::|:   |||.:......||     ..|:|..||  ||| .:.|:|.||.|:.|.: |.::..
Human    16 PCSLPM---LSVDMENKENGSV-----GVKNSMENG--RPPDPADWAVMDVVNYFRTV-GFEEQA 69

  Fly  1533 DDFIQQEIDGQALLLLKEKHLVNAMGMKLGPALKI 1567
            ..|.:|||||::|||:....::..:.:||||||||
Human    70 SAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 SAM_Ph1,2,3 1508..1576 CDD:188976 25/60 (42%)
SAM 1511..1576 CDD:197735 23/56 (41%)
SAMD13XP_016855866.1 SAM_Atherin-like 48..116 CDD:188982 23/57 (40%)
SAM 48..104 CDD:197735 22/56 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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