DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ph-p and phc1

DIOPT Version :10

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:XP_031761253.1 Gene:phc1 / 100488113 XenbaseID:XB-GENE-1013248 Length:852 Species:Xenopus tropicalis


Alignment Length:962 Identity:248/962 - (25%)
Similarity:373/962 - (38%) Gaps:261/962 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   759 QNGQTLHAATAAGVDKQQQ--QLQLFQKQQILQQQQMLQQQIAAIQMQQQQAAVQAQQQQQQQVS 821
            ||..:.:.::|:|...:.|  |:.|:::|.:        |.:.|:..|...|....|...|||:|
 Frog     7 QNSSSTNGSSASGSSTRPQISQMSLYERQAV--------QALQALHRQPNAAQYFHQLMLQQQLS 63

  Fly   822 QQQ--QVNAQQQQAVAQQQQAVA----QAQQQQREQQQQVAQAQAQHQQALANATQQILQVAPNQ 880
            ..|  .:.|.||..:|..:||.:    .|||....|..|...:.:...|.|:. ||.:  .||:.
 Frog    64 NAQLHSLAAVQQATIAASRQAASPNTGSAQQTNTTQGSQANLSTSSSAQLLSR-TQNV--TAPSA 125

  Fly   881 FITSHQQQQQQQLHNQLIQQQLQQQAQAQVQAQVQAQAQQQQQQREQQQNIIQ------------ 933
                          ..|.|..|...|.:....|.|.|...:|   .|..|::|            
 Frog   126 --------------TTLTQSVLLSNASSPPLGQSQTQMYLRQ---PQLGNLLQVNRSLGRGVPLN 173

  Fly   934 -QIVVQQSGATSQQ---TSQQQQ--HHQSGQLQLSSVPFSVSSSTT---------PAGIATSSAL 983
             |:::..:|:.:.|   ||.|.|  |..|.|:|..:|....:::||         ||.:||...:
 Frog   174 SQLILMPNGSVAVQQEVTSPQNQGVHQDSDQVQNLAVRGQQTAATTSAAGATISQPAPLATKPQI 238

  Fly   984 QAALSA------SGAIFQTAK------PGTCSSSSPT-------------SSVVTITNQSSTP-- 1021
            ..|.||      |..:.|:.|      .||.|..|.|             .||.....:::||  
 Frog   239 HPASSAAPTQIPSPNVPQSVKNPVGSTGGTVSQGSQTEAEGRKADGEGVQQSVGINLTRAATPAP 303

  Fly  1022 ---LVTSSTVASI------QQAQT---QSAQVHQHQ--QLISATI-------AGGTQQQPQGPPS 1065
               |::|:|...|      ||.|.   |...:|||:  ||:.|:.       ...|||..|    
 Frog   304 NQTLISSATYTHIQPHSVLQQKQVVFQQQIAIHQHRQSQLLHASTHLQLAQPQAATQQGLQ---- 364

  Fly  1066 LTPTTNPILAMTSMMNAT-VGHLSTAPPVTVSVTSTAVTSSPGQLV-------LLSTASSGGGGS 1122
             ||.|...|.:..|:.|| ...:.|..||.:.      ...||:.|       .|...:|.|...
 Frog   365 -TPGTQQTLVVQPMLQATSESAIPTKAPVPIQ------PKQPGKGVPPLNLQGHLGAKASQGTRP 422

  Fly  1123 IPATPTKETP----------SKGPTATLVPIGSPKTP--VSGKDTCTTPKSSTPATVSASVEASS 1175
            :| .|:...|          .:||...|. :|:.:.|  .|.....|.|.|  ||.|::.|..:.
 Frog   423 LP-IPSPSQPHIPVQLVGARQQGPAQALA-LGATQVPSQASSMTQLTLPPS--PAPVASVVAGAV 483

  Fly  1176 STGEALSNGDASDRSSTPSKGATTPTSKQSNAAVQPPSSTTPNSVSGKEEPKLATCGSLTSATST 1240
            ...:|...|....:.|.|.|........:.:.:|.|..::.|.......|             .|
 Frog   484 QESQAGFYGVLQGKLSGPGKRKAEVEDDRDDPSVLPVKASPPTDAPPTVE-------------ET 535

  Fly  1241 STTTTITNGIGVARTTASTAVSTASTTTTSSGTFITSCTSTTTTTTSSISNGSKDLPKAMIKPNV 1305
            ||...        :..|:|.||...|        :.:.||....:.||..:.....|:|::||.:
 Frog   536 STPAD--------KPEAATQVSPTLT--------VLAPTSVPALSISSRQHSDSKPPQAIVKPQI 584

  Fly  1306 LTHVIDGFIIQEANEPFPVTRQRYADKDVSDEPPKKKATMQEDIKLSGIASAP------------ 1358
            |||:|:||:|||..|||||     ....:..||.|:.|:  :.:.|....|.|            
 Frog   585 LTHIIEGFVIQEGAEPFPV-----GSPQLLKEPEKQAAS--DTVLLPPAESPPPQAVGDTAASDS 642

  Fly  1359 -GSDMVACEQCGKMEHKAKLK-RKRYCSPGCSR--------------------QAKNGIGGVGSG 1401
             .|.::.||.|||.....:.: .||:||..|::                    |...|:.....|
 Frog   643 GSSKLLKCEYCGKYAPAEQFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKLKELQEAGGVRARRRG 707

  Fly  1402 ---ETNGLGTGGIVGVDAMALVDRLDEAMAEEKMQTEATPKLSESFPILGASTEVPPMSLPVQAA 1463
               .::.:....|.|           :.|.|:..:........|:|   ..::..||        
 Frog   708 PRRNSSEIARAKIQG-----------KRMREDSSRGSDNSSYDEAF---SPNSPAPP-------- 750

  Fly  1464 ISAPSPLAMPLGSPLSVALPTLAPLSVVTSGAAPKSSEVNGTDRPPISS----WSVDDVSNFIRE 1524
             |..:|.....||               |....|.:|::.|.:...:||    |||::|..||..
 Frog   751 -SCRTPHGDRDGS---------------TPTGGPSNSDLLGINPMFLSSNPSRWSVEEVYEFISS 799

  Fly  1525 LPGCQDYVDDFIQQEIDGQALLLLKEKHLVNAMGMKLGPALKIVAKVESIKE 1576
            |.||||..:||..|||||||||||||:||::|:.:||||||||.||:..:||
 Frog   800 LQGCQDLAEDFRSQEIDGQALLLLKEEHLMSALNIKLGPALKICAKINLLKE 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 DUF5585 1015..>1232 CDD:465521 61/259 (24%)
SAM_Ph1,2,3 1508..1576 CDD:188976 41/71 (58%)
phc1XP_031761253.1 PHA03247 <381..631 CDD:223021 71/295 (24%)
PHC2_SAM_assoc 678..783 CDD:465202 19/142 (13%)
SAM_Ph1,2,3 783..851 CDD:188976 40/67 (60%)

Return to query results.
Submit another query.