DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16903 and CCNT1

DIOPT Version :9

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001231.2 Gene:CCNT1 / 904 HGNCID:1599 Length:726 Species:Homo sapiens


Alignment Length:601 Identity:132/601 - (21%)
Similarity:211/601 - (35%) Gaps:171/601 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LENSLIPEGKIDVTPSSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSK 150
            ||||          ||.:.|:|.:.|...|.....|:|..|..|.:.|:.:.|..|...||:..:
Human    19 LENS----------PSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQ 73

  Fly   151 SFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFH---HIKQVRAQKEISPMVLDPYYTNLKMQ 212
            ||.:....:||.:.:.||:|:||.|:::..||.|.|   |      .:|..|......|......
Human    74 SFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLH------PQESLPDTRSEAYLQQVQD 132

  Fly   213 VIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEKHEKLMQLSWNFMNDSLRTDVF-MRYTPEA 276
            ::..|..:|:.|||.:.:.|||..:|...|:::..|  .|.|.|:....:||....| ::|||..
Human   133 LVILESIILQTLGFELTIDHPHTHVVKCTQLVRASK--DLAQTSYFMATNSLHLTTFSLQYTPPV 195

  Fly   277 IACACIYLSARKLNIPLPNSPP---WFGIFRVPMADITDICYRVMELYMRSKPVVEKLEAAVDEL 338
            :||.||:|:.:..|..:|.|..   |:     ...|.|.....:.||   :...::.||...:.|
Human   196 VACVCIHLACKWSNWEIPVSTDGKHWW-----EYVDATVTLELLDEL---THEFLQILEKTPNRL 252

  Fly   339 KK----RYIDARNKTK-------EANTPPAVITVDRNNGSHNAWGGFIQ------RAIP-LPLPS 385
            |:    |..:|..|||       |..:...::.:...:.|.....|.:.      .|:| ||:..
Human   253 KRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQSSSDTTIAGLMSMSTSTTSAVPSLPVSE 317

  Fly   386 EKS--------------------------------------------PQKDS------RSRSRS- 399
            |.|                                            ||..|      :..|:| 
Human   318 ESSSNLTSVEMLPGKRWLSSQPSFKLEPTQGHRTSENLALTGVDHSLPQDGSNAFISQKQNSKSV 382

  Fly   400 ----------RTR-----------------------------------THS----RTPRSRSPRS 415
                      |.:                                   :||    :.|...|...
Human   383 PSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAYAAQNLLSHHDSHSSVILKMPIEGSENP 447

  Fly   416 RSPSRERTKKTHR------SRSSRSRSRSPPK-------HKKKSRHYS--RSPTRSNSPHSKHRK 465
            ..|..|:..||..      :...::.|..|.:       |....:|.|  .|.|:|.....||:.
Human   448 ERPFLEKADKTALKMRIPVAGGDKAASSKPEEIKMRIKVHAAADKHNSVEDSVTKSREHKEKHKT 512

  Fly   466 SKSS--RERSEYYSKKDRSGNPGSSNNLGDGDKYRNSVSNSGKHSRYSSSSSRRNSGGGGDGRSG 528
            ..|:  ...:.:..|...|..|..:.|...||...:|.:::..|..||.|||..:|   ...|..
Human   513 HPSNHHHHHNHHSHKHSHSQLPVGTGNKRPGDPKHSSQTSNLAHKTYSLSSSFSSS---SSTRKR 574

  Fly   529 GGGGGGGGGNGNHGSR 544
            |.....||...:|.::
Human   575 GPSEETGGAVFDHPAK 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN 114..203 CDD:238003 27/91 (30%)
CYCLIN 235..321 CDD:214641 24/89 (27%)
CCNT1NP_001231.2 Cyclin_N 13..149 CDD:278560 42/145 (29%)
Nuclear localization signal, and interaction with Tat-TAR RNA. /evidence=ECO:0000255 253..270 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..385 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 487..650 28/107 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 688..726
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.