DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16903 and CCL1

DIOPT Version :9

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_015350.1 Gene:CCL1 / 856136 SGDID:S000006229 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:501 Identity:96/501 - (19%)
Similarity:158/501 - (31%) Gaps:167/501 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NISNNNSSSGAAPGADAAGGDAGGVAAAQADANK-PIYPRLFN---------------------- 80
            :|..|..|:...|.|..:..:......:..:.|| |.|.|:.:                      
Yeast     3 DIQLNGKSTLDTPSATMSAKEKEAKLKSADENNKPPNYKRISDDDLYRHSSQYRMWSYTKDQLQE 67

  Fly    81 -------RIVLTLENSL--------IPEGKIDVTPSSQDGLDHETEKDLRILGCELIQTAGILLR 130
                   |.:..:|.:|        :.|.:|.|..:....|..|.|.||.....:.:|.....|.
Yeast    68 KRVDTNARAIAYIEENLLKFREAHNLTEEEIKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLN 132

  Fly   131 LPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQK 195
            ||...:||....|:|||...|.::.:.:::..:.:.||.|.|          |.|..:... |||
Yeast   133 LPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSE----------NYFISVDSF-AQK 186

  Fly   196 EISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLI---VMYLQVLQYEKHEKLMQLSW 257
            ..|          .:..|:|.|.::|:.|.|.:...||:|.:   .:.:|.:.|.|      :..
Yeast   187 AKS----------TRDSVLKFEFKLLESLKFSLLNHHPYKPLHGFFLDIQNVLYGK------VDL 235

  Fly   258 NFMND-----------SLRTDVFMRYTPEAIACACIY-----LSARKLNIPLPNSPPWFGIFRVP 306
            |:|..           :|.|||...|||..|..|.:.     |..|.|....|:           
Yeast   236 NYMGQIYDRCKKRITAALLTDVVYFYTPPQITLATLLIEDEALVTRYLETKFPS----------- 289

  Fly   307 MADITDICYRVMELYMRSKPVVEKLEAAVDELKKRYIDARNKTKEANTPPAVITVDRNNGSHNAW 371
                       .|....|.|..||.|...|                     ..|.::|       
Yeast   290 -----------REGSQESVPGNEKEEPQND---------------------ASTTEKN------- 315

  Fly   372 GGFIQRAIPLPLPSEKSPQKDSRSRSRSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRS 436
                         .|||.:.:..|...::..|..|..:|.....:.||.|..||.          
Yeast   316 -------------KEKSTESEEYSIDSAKLLTIIRECKSIIEDCKPPSTEEAKKI---------- 357

  Fly   437 RSPPKHKKKSRHYSRSPTRSNSPHSKHRKSKSSRERSEYYSKKDRS 482
                   ....:|.::|   ::...|.::..:..:.|....||.::
Yeast   358 -------AAKNYYCQNP---STLIQKLKRKLNGEDTSSTVEKKQKT 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN 114..203 CDD:238003 22/88 (25%)
CYCLIN 235..321 CDD:214641 20/104 (19%)
CCL1NP_015350.1 ccl1 49..376 CDD:129660 83/436 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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