DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG16903 and AT5G45190

DIOPT Version :9

Sequence 1:	NP_569980.1	Gene:	CG16903 / 31178	FlyBaseID:	FBgn0040394	Length:	560	Species:	Drosophila melanogaster
Sequence 2:	NP_001154763.1	Gene:	AT5G45190 / 834555	AraportID:	AT5G45190	Length:	590	Species:	Arabidopsis thaliana

Alignment Length:	573	Identity:	134/573 - (23%)
Similarity:	218/573 - (38%)	Gaps:	155/573 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    99 TPSSQDGLDHETEKDLRILGCELIQTAGILLRL-----------PQVAMATGQVLFQRFFYSKSF 152
            :||..||:|.:.|..||...|..:|..|:.|:|           ..|.:||..:...|||:.:|.
plant    44 SPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKLAWFLDIIAYVCTDVTIATAIIFCHRFFFRQSH 108

  Fly   153 VRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHI--------KQVRAQKEISPMVLDPYYTNL 209
            .:::..|:|..|:.||.|:||.||.::|||.|.:.|        .|...|||:        |...
plant   109 AKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKDPGASQKIKQKEV--------YEQQ 165

  Fly   210 KMQVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEKHEKLMQLSWNFMNDSLRTDVFMRYTP 274
            |..::..|:.||..|||.::|.||:|.:|..::..:..:: .|.|::|||:||.|||.:.:::.|
plant   166 KELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQN-ALAQVAWNFVNDGLRTSLCLQFKP 229

  Fly   275 EAIACACIYLSARKLNIPLPN--SPPWFGIFRVPMADITDICYRVMELYMRSK-PVVE--KLEAA 334
            ..||...|:|:|:.|.:.||:  ...|:..|.|....:.|:..:::|||.::: |..:  ::|::
plant   230 HHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQGSEVESS 294

  Fly   335 V----------------DELKKRYIDAR------------NKTKEANTPPAVITVDRNNG----- 366
            |                ||    ::.:|            |......:...|:..:..||
plant   295 VGGGSAQRPGSRNAVSTDE----HVGSRQTSSVRSTHEQSNSDNHGGSSKGVLNQNNENGGGEAA 355

  Fly   367 ----------------------SHNAWGGFIQRAIPLPLPSEKSPQKDSRSRSRSRTRTHSRTPR 409
                                  ||.|....::.|.....|..:.|.||:..|.....:......:
plant   356 NVSVDNKEEIERETKESSLHLESHPAHKDNVREAPHNSRPLVEGPGKDNSEREGGELQDDGAVHK 420

  Fly   410 SR-----------SPRSRSPSRERTK----KTHRSRSSRSRSR------------------SPPK 441
            ||           ||:.....|::.|    |..:....|:|.:                  :...
plant   421 SRNVDVGDALISQSPKDLKLLRDKVKAKREKAKKLLGERTRKKDLMDEDDLIERELEDVQLAVED 485

  Fly   442 HKKKSRHYSRSPTRSNSPHSKHRKSKSSRERSEYYSKKDRSGNPGSSNNLGDGDKYRNSVSNSGK 506
            .|.|.|.....|...||       .....|..|....|      |...|..:|:...|:||.. .
plant   486 EKTKERKVQSRPKAENS-------DLMGTEHGEILDVK------GEVKNTEEGEMVNNNVSPM-M 536

  Fly   507 HSR----------YSSSSSRRNSGGGGDGRSGGGGGGGGGGNGNHGSRGGHKH 549
            |||          .|....|.||..|.:...      ...|:.:||.|...:|
plant   537 HSRKRKMGSPPEKQSEGKRRHNSENGEESHK------TSRGSSHHGDREHRRH 583

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG16903	NP_569980.1	CYCLIN	114..203	CDD:238003	33/107 (31%)
CG16903	NP_569980.1	CYCLIN	235..321	CDD:214641	26/87 (30%)
AT5G45190	NP_001154763.1	Cyclin_N	33..185	CDD:278560	47/148 (32%)
AT5G45190	NP_001154763.1	CYCLIN	193..279	CDD:214641	26/86 (30%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5333
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1437076at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820