DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and CYCT1;2

DIOPT Version :9

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_193691.2 Gene:CYCT1;2 / 827698 AraportID:AT4G19560 Length:460 Species:Arabidopsis thaliana


Alignment Length:391 Identity:110/391 - (28%)
Similarity:170/391 - (43%) Gaps:92/391 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 NNSSSGAAPGADAAGGDAGGVAAAQADANKPIYPRLFNRIVLTLENSLIPEGKIDVTPSSQDGLD 107
            |.::||:.       .||..||:...|  ..|.|..|:|..:. .||          ||.:||:|
plant     6 NENASGSE-------SDASSVASNLHD--DEIIPWFFSREEIE-RNS----------PSRRDGID 50

  Fly   108 HETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIE 172
            .:||..||...|..::..|..|::|||.:||......|||..:|..:::.:|:|..|:.||.|:|
plant    51 LKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVE 115

  Fly   173 EAPRRIRDVINVFH---HIKQVRA--QKEISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKH 232
            |.|..:.|||...:   |.|.:..  :||:        |...|..|:..|..||..|.|.:.:.|
plant   116 ETPVTLEDVIIASYERIHKKDLAGAQRKEV--------YDQQKELVLIGEELVLSTLNFDLCISH 172

  Fly   233 PHKLIVMYLQVLQYEKHE-KLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNS 296
            |:|.:|..::....|..: :|.|.:|||:||.|||.:.::|.|..||...|.|:|....:.|.: 
plant   173 PYKPLVEAIKKYMVEDAKTQLAQFAWNFVNDCLRTTLCLQYQPHHIAAGAILLAAELPTVDLQS- 236

  Fly   297 PPWFGIFRVPMA---DIT-----DICYRVMELYMRSKPVVEKLEAAVDELKKRYIDARNKTK-EA 352
                  :|..:.   |||     ||..:::|||.|                   |....::| |:
plant   237 ------YREVLCQEFDITPCQLEDIRGQILELYER-------------------IPTSQESKVES 276

  Fly   353 NTPPAVI--TVDRNNGSHNAWGGFIQRAIPLPLPSEKSPQKD----SRSRSRSRTRTHSRTPRSR 411
            :...||:  .:.|:..|                 :||.|..|    |...:.|::..||....||
plant   277 SGGVAVVHQPISRDMAS-----------------TEKCPSSDIEGGSSQVNLSQSDDHSVHDGSR 324

  Fly   412 S 412
            |
plant   325 S 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN 114..203 CDD:238003 30/93 (32%)
CYCLIN 235..321 CDD:214641 28/94 (30%)
CYCT1;2NP_193691.2 Cyclin_N 29..169 CDD:278560 50/158 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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