DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG16903 and RCY1

DIOPT Version :9

Sequence 1:	NP_569980.1	Gene:	CG16903 / 31178	FlyBaseID:	FBgn0040394	Length:	560	Species:	Drosophila melanogaster
Sequence 2:	NP_565622.1	Gene:	RCY1 / 817183	AraportID:	AT2G26430	Length:	416	Species:	Arabidopsis thaliana

Alignment Length:	438	Identity:	152/438 - (34%)
Similarity:	218/438 - (49%)	Gaps:	65/438 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    82 IVLTLENSLIPEGKIDVTPSSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRF 146
            |...::|..:.:.::..:||.:||:|..||..|||.||:|||..||||:|||..|||||||||||
plant     2 IYTAIDNFYLSDEQLKASPSRKDGIDETTEISLRIYGCDLIQEGGILLKLPQAVMATGQVLFQRF 66

  Fly   147 FYSKSFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPMV-LDPY---YT 207
            :..||..:.:::.||.|||.||||:||.|::.|.||.|||   ::..::|..|:. ||.|   ::
plant    67 YCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFH---RMECRRENLPLEHLDMYAKKFS 128

  Fly   208 NLKMQVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEKHEKLMQLSWNFMNDSLRTDVFMRY 272
            .||:::.:.||.:|||:||..||:||||.|..||..|  |...:|.|.:||..||||||.:.:|:
plant   129 ELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATL--ETPPELRQEAWNLANDSLRTTLCVRF 191

  Fly   273 TPEAIACACIYLSARKLNIPLPNSPPWFGIFRVPMADITDICYRVMELYMRSKPVVEKLEAAVD- 336
            ..|.:||..:|.:||:..:|||.:|||:..|....:.|.::|..:..||  |.|..:.:....|
plant   192 RSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSSIDEVCRVLAHLY--SLPKAQYISVCKDG 254

  Fly   337 -----------------------------ELKKRYIDARNKTKE--ANTPPAVITVDRNNGSHNA 370
                                         :.|.....|.|..|:  ..||....|..:.:|:.
plant   255 KPFTFSSRSGNSQGQSATKDLLPGAGEAVDTKCTAGSANNDLKDGMVTTPHEKATDSKKSGTE-- 317

  Fly   371 WGGFIQRAIPLPLPSEKSPQKDSRSRSRSRTRTHSRTPRSRSPRSRSPSRERTK-KTHRSR-SSR 433
                          |...|.....|..||:.....|    .|.|.:...|||.: ::||.| |.|
plant   318 --------------SNSQPIVGDSSYERSKVGDRER----ESDREKERGRERDRGRSHRGRDSDR 364

  Fly   434 SRSRSPPKHKKKSRHYSRSPTRSNSPHSKHRKSKSSRERSEYYSKKDR 481
            ...|...|.|.:|.|.||...:.:..||...:..|||:|....|.|||
plant   365 DSDRERDKLKDRSHHRSRDRLKDSGGHSDKSRHHSSRDRDYRDSSKDR 412

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG16903	NP_569980.1	CYCLIN	114..203	CDD:238003	48/89 (54%)
CG16903	NP_569980.1	CYCLIN	235..321	CDD:214641	32/85 (38%)
RCY1	NP_565622.1	CYCLIN_AcCycL_rpt1	21..148	CDD:410294	65/129 (50%)
		CYCLIN_AcCycL_rpt2	150..250	CDD:410297	41/103 (40%)
		SF-CC1	336..>414	CDD:273721	28/81 (35%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	114	1.000	Domainoid score	I2014
eggNOG	1	0.900	-	-		E1_COG5333
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	235	1.000	Inparanoid score	I1112
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002258
OrthoInspector	1	1.000	-	-		oto3657
orthoMCL	1	0.900	-	-		OOG6_102010
Panther	1	1.100	-	-	LDO	PTHR10026
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1491
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	10	9.820