DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and ccnq

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_009295009.1 Gene:ccnq / 553650 ZFINID:ZDB-GENE-050522-495 Length:254 Species:Danio rerio


Alignment Length:231 Identity:69/231 - (29%)
Similarity:109/231 - (47%) Gaps:35/231 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 CELIQTAGIL-------LRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIEEAPR 176
            |..|...||.       |.:..|.|||..||:.|||.|.|...:....||||.:.||.|:||...
Zfish    33 CRFITETGICIFMKWVKLGMRSVPMATACVLYHRFFQSASLQIYEPYLVAMSAIYLAGKVEEQHL 97

  Fly   177 RIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLIVMYL 241
            |.||:|||.|..    ...:..|:.|:..:..|:..:::.|..:|::|.|.|..:||||.::.||
Zfish    98 RTRDIINVCHRY----FHPDSEPLELNGKFWELRDSIVQCELLILRQLNFQVTFEHPHKYLLHYL 158

  Fly   242 QVLQYEKHEKLMQLSWN----------FMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNS 296
            ..::    ..|.:.:|:          .:.||....|.:|:.|:.:|...:||:.:...:.||..
Zfish   159 LSVR----SLLNRHAWSRTPIAETALAVLKDSYHGSVCVRHRPQHLALTALYLALQTYGVQLPRG 219

  Fly   297 P-PWFGIFRVPMADIT-----DICYRVMELY-MRSK 325
            . .|   ::|..||||     .|...:::|| |.:|
Zfish   220 ELEW---WQVVCADITKAQIETIMSELLQLYDMEAK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 38/114 (33%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 27/107 (25%)
SDP_N <440..>482 CDD:463517
ccnqXP_009295009.1 CYCLIN_CCNM_CCNQ_rpt1 28..144 CDD:410237 38/114 (33%)
CYCLIN_CCNM_CCNQ_rpt2 149..249 CDD:410238 27/106 (25%)
Blue background indicates that the domain is not in the aligned region.

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