DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and ccnk-1

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_506615.2 Gene:ccnk-1 / 185704 WormBaseID:WBGene00009650 Length:252 Species:Caenorhabditis elegans


Alignment Length:251 Identity:72/251 - (28%)
Similarity:120/251 - (47%) Gaps:23/251 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PEGKIDVTPSSQDGLDHETEKDLRILGCELIQTAGILLRL-PQVAMATGQVLFQRFFYSKSFVRH 155
            |...:..|||.:.||..|.|...|..|.:|:...|..|.. |:..:....|.|.||:...||...
 Worm     7 PLEALKTTPSIRAGLTKEQELLWRREGIKLLSEVGNALNCKPRPTIGVAAVYFHRFYMIHSFQSF 71

  Fly   156 NMETVAMSCVCLASKIEEAPRRIRDVIN-VFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERR 219
            :.|..|:||:.||.|:|:.|::.:||.. ...|..::.::           |.||...|:..||.
 Worm    72 SREVTALSCLFLAGKVEDFPKKCKDVCQAAVTHYPEIYSK-----------YQNLVDDVMGLERV 125

  Fly   220 VLKELGFCVHVKHPHKLIVMYLQVLQYEKHEKL---MQLSWNFMNDSLRTDVFMRYTPEAIACAC 281
            :|..|.|.:||..|:..::.|..:......||:   :|::|.|:|||:.|.:.:...|:.||.|.
 Worm   126 LLHSLKFDLHVALPYDALLDYKMMFPDMNREKITDAVQIAWTFINDSIYTTLCITTEPQMIAIAL 190

  Fly   282 IYLS-ARKLNIPLPNS--PPWFG--IFRVPMADITDICYRVMELY--MRSKPVVEK 330
            ::|: ..|...|:..:  |.|:.  :...|...:...|:.|::.|  .:.|||:||
 Worm   191 LHLAFTVKGYQPVQKNMDPCWWSADVSNWPQESVDKACHLVLDFYAATKEKPVLEK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 36/124 (29%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 24/100 (24%)
SDP_N <440..>482 CDD:463517
ccnk-1NP_506615.2 CCL1 12..250 CDD:227640 71/246 (29%)
CYCLIN_CCNK_rpt1 20..133 CDD:410233 36/123 (29%)
Blue background indicates that the domain is not in the aligned region.

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