DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and cyl-1

DIOPT Version :9

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_506007.1 Gene:cyl-1 / 179643 WormBaseID:WBGene00000876 Length:480 Species:Caenorhabditis elegans


Alignment Length:434 Identity:170/434 - (39%)
Similarity:236/434 - (54%) Gaps:49/434 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KPIYPRL---FNRIVLTL-ENSLIPEGKIDVTPSSQDGLDHETEKDLRILGCELIQTAGILLRLP 132
            :|:|.::   .::.::|| |.|.:   |||..||..|||..|||.:||.|||||||...|||:||
 Worm    62 RPLYSKVDINCDKWLMTLDEESRL---KIDNPPSLVDGLSKETESELRYLGCELIQQGAILLKLP 123

  Fly   133 QVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQV-RAQKE 196
            |.|.||||:||||::|.|||||::.|....:|:.|||||||.|||.|:|.||||.:::: |.|:.
 Worm   124 QTAAATGQILFQRYYYQKSFVRYHFEHAVQACLLLASKIEEEPRRPREVYNVFHRLERLHRLQQS 188

  Fly   197 -----------ISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQY-EKH 249
                       :.|..:|..|.|.|..:|.:|||:|..|||.|||||||:|||.|...|.. :..
 Worm   189 GHDINKETTRGMKPPAVDMNYINTKQHMINSERRILATLGFVVHVKHPHRLIVAYGHTLGITQSR 253

  Fly   250 EKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIP--LPNSP-PWFGIFRVPMADIT 311
            ..::|.|||:|||.||||:||||.||.||||||:|:||.:..|  ||::| .||..|.....|:.
 Worm   254 PDILQRSWNYMNDGLRTDIFMRYKPETIACACIFLAARTVENPIALPSTPFHWFEAFDTSDRDVE 318

  Fly   312 DICYRVMELY-MRSKPVVEKLEAAVDELKKRYIDARN---KTKEANTPPAVITVDRNNGSHNAWG 372
            .|..:::.|| .|:.|...:::|.:|.|:. ..||..   |.||.....|.:..|....:.....
 Worm   319 AIALQLVGLYARRTFPNWPRIKAELDALRS-VKDAEMKAVKAKEIAENLAKMAPDGEKSTSTVTI 382

  Fly   373 GFIQRAIPLPLPSEKSPQKD-------SRSRSRSRTRTHSRTPRSRSPRSRSPSR-ERTKKTHRS 429
            |...|.:.   |..|:..||       .:.:.|.|.|::.|..|. ..|.|...| :|.|...:.
 Worm   383 GKDSRKVS---PDRKNGTKDRGEADRGKKEKDRHRRRSNDRDGRG-DRRDRDKDRGDRRKDEKKD 443

  Fly   430 RSSRSRSRSPPKHKKKSRHYSRSPTRSNSPHSKHRKSKSSRERS 473
            |..|:||||..:..|         .|:.....::||..|:..||
 Worm   444 RRKRTRSRSRDRKDK---------NRNRDVGKRYRKESSTPPRS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN 114..203 CDD:238003 51/100 (51%)
CYCLIN 235..321 CDD:214641 40/89 (45%)
cyl-1NP_506007.1 CYCLIN 105..181 CDD:238003 48/75 (64%)
CYCLIN 232..>296 CDD:238003 37/63 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166511
Domainoid 1 1.000 127 1.000 Domainoid score I3342
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 249 1.000 Inparanoid score I2016
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002258
OrthoInspector 1 1.000 - - oto17814
orthoMCL 1 0.900 - - OOG6_102010
Panther 1 1.100 - - LDO PTHR10026
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1832
SonicParanoid 1 1.000 - - X1491
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.920

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