DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and LOC1277948

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_317464.4 Gene:LOC1277948 / 1277948 VectorBaseID:AGAMI1_007873 Length:374 Species:Anopheles gambiae


Alignment Length:396 Identity:106/396 - (26%)
Similarity:171/396 - (43%) Gaps:73/396 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 TPSSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMS 163
            |||::||:|:|||:..|..|...|..||..:.|....:|||.|.|.||:...||........|..
Mosquito    14 TPSARDGVDYETERRYRREGARFIMEAGASMSLGHNTVATGVVYFHRFYMFHSFRTFPRFVTASC 78

  Fly   164 CVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERRVLKELGFCV 228
            |:.||.|:||.|::.:|:|..        |:..:|......:..:.|.:|:..||.:|:.:.|.:
Mosquito    79 CLFLAGKVEETPKKCKDIIKT--------ARGLLSDEKFQSFGDDPKEEVMTLERILLQTIKFDL 135

  Fly   229 HVKHPHKLIVMYLQVLQYE--KHEKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNI 291
            .|:||:..:|.|.:.|:.:  |.:|::|::|||:||||.|.|.:::.||.||.|.|||:::....
Mosquito   136 QVEHPYSFLVKYAKCLKGDSAKLQKMVQMAWNFVNDSLSTTVSIQWEPEIIAVALIYLASKLSKF 200

  Fly   292 PL-------PNSPPWFGIF--RVPMADITDICYRVMELYMRSKPVVEKLEAAVDELKKRY--IDA 345
            .:       |....|:.:|  .|.|..:.:||::|::||..|     :.|:|..:...:.  ..|
Mosquito   201 TVVEWVGKKPEHLKWWDMFVQDVTMEILEEICHQVLDLYQPS-----QAESAPSKSPPQLPPSKA 260

  Fly   346 RNKTKEANTPPAVITVDRNNGSHNAWGGFIQRAIPLPLPSEKSPQKDSRSRSRSRTRTHSRTPRS 410
            ....|.||..|  ||   :..|.|.       |:..|||    |...:.....:....|..|...
Mosquito   261 SPPMKRANISP--IT---SKNSPNI-------AVKTPLP----PMPPTEVVEANPIPKHITTENP 309

  Fly   411 RSPRSRSPSRERTKKTHRSRSSRSRSRSPP---------------------KHKKKSRHYSRSPT 454
            ..|....|......:.|          .||                     .|...:::|...|.
Mosquito   310 HYPYPPYPMPPMPPQGH----------GPPLPYVTMPPVIPPQPPAGWTHYSHPNANKYYPPGPP 364

  Fly   455 RSNSPH 460
            ...:|:
Mosquito   365 PGRNPY 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 38/122 (31%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 35/101 (35%)
SDP_N <440..>482 CDD:463517 5/42 (12%)
LOC1277948XP_317464.4 CYCLIN_CCNK_rpt1 20..134 CDD:410233 37/121 (31%)
CYCLIN_CCNK_rpt2 138..239 CDD:410234 33/100 (33%)

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