DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16903 and CycT

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_316716.4 Gene:CycT / 1277267 VectorBaseID:AGAMI1_004995 Length:1499 Species:Anopheles gambiae


Alignment Length:553 Identity:134/553 - (24%)
Similarity:208/553 - (37%) Gaps:116/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SSSGAAPGADAAGGDAGGVAAAQADANKPIYPRLFNRIVLTLENSLIPEGKIDVTPSSQDGLDHE 109
            |.||:|.|..:...|:.....|:..||                           :||.:.|:|.:
Mosquito     3 SGSGSASGTTSKNDDSKWYFTAEQLAN---------------------------SPSRKAGMDAD 40

  Fly   110 TEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIEEA 174
            .|...|.....|||..|..|::.|:.:.|..|...||:...||.:.:..::|.:.:.||:|:||.
Mosquito    41 QELMYRQRAANLIQDMGQRLQVSQLCINTAIVYMHRFYAFHSFTQFHRNSIAAAALFLAAKVEEQ 105

  Fly   175 PRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLIVM 239
            ||::..:|.|.|....:.|     |..|...|......::..|..:|:.|||.|.:.|||..:|.
Mosquito   106 PRKLEHIIKVVHISLGMEA-----PDPLRESYAEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVK 165

  Fly   240 YLQVLQYEKHEKLMQLSWNFMNDSLR-TDVFMRYTPEAIACACIYLSARKLNIPLPNSPP---WF 300
            ...:::..|  .|.|.|:...::||. |.:.::|.|..:||.||:|:.:.....:|.|..   ||
Mosquito   166 TCHLVKASK--DLAQTSYFMASNSLHLTTMCLQYKPTVVACFCIHLACKWSRWEIPQSNEGRHWF 228

  Fly   301 GIFRVPMADITDICYRVMELYMRSKPVVEKLEAAVDEL-------------KKRYIDARNKTKEA 352
            .                   |:.....::.|:...||.             |.:.|.|.:..:|:
Mosquito   229 H-------------------YVDKTVTLDLLKQLTDEFLHIFDRCPTRLKSKMKSIRADSGAEES 274

  Fly   353 NTPPAVITVDRNNGSHNAWGGFIQRAIPLPLPSEKSPQK--DSRSRSRSRTRTHSRTPRSRSPRS 415
            ..        |..||.::....      :..||..|..:  |..|...|...:|.|..:..|...
Mosquito   275 GR--------RTGGSSSSSNSL------MAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDM 325

  Fly   416 RSPSRERTKKTHR--------SRSSRSRSRSPP------------KHKKKSRHYSRSPTRSNSPH 460
            ..|....:..:|:        |.||||||..||            :....|:||. |.:.|||..
Mosquito   326 MKPHGMSSSGSHQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYG-SGSSSNSSS 389

  Fly   461 SKHRKSKSSRERSEYYSKKDRSGNP-GSSNNLGDGDKYRNSVSNSGKHSRYSSSSS---RRNSGG 521
            |...|...|..|...........|| |:..:...|..|:.  ...|..||..||:|   ::.|||
Mosquito   390 STSSKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQG--HEGGSKSRQPSSASGLLQQASGG 452

  Fly   522 GGDGRSGGGGGGGGGGNGNHGSRGGHKHRDGDR 554
            ...|.:||.....|..:..|   .|:.....||
Mosquito   453 APAGSAGGSTASSGSSSSMH---SGYNQMKADR 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 35/122 (29%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 23/94 (24%)
SDP_N <440..>482 CDD:463517 12/53 (23%)
CycTXP_316716.4 None

Return to query results.
Submit another query.