DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4025 and Dram1

DIOPT Version :10

Sequence 1:NP_569979.1 Gene:CG4025 / 31177 FlyBaseID:FBgn0025624 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001166898.1 Gene:Dram1 / 679937 RGDID:1598133 Length:238 Species:Rattus norvegicus


Alignment Length:231 Identity:82/231 - (35%)
Similarity:122/231 - (52%) Gaps:18/231 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LPVLTFLIFQVTFLGTYIFAVLEGHVVPTVPYISDAATYSPESCVFGQLINIGSVLLGITIYVRY 71
            :|.|........|:.:|:.|||.|||.|.:|||||..|..|||.:||.:||..:.|...|:|.||
  Rat    11 VPFLLVTWSSAAFIISYVVAVLSGHVNPFLPYISDTGTTPPESGIFGFMINFSAFLGAATMYTRY 75

  Fly    72 RQVLQ----LYEHHPDLDGSVLRQNRLALWFGLVSCLGISFVGNFQETNVRIVHFIGAFCCFGCG 132
            :.|.:    .|...|..       |.::|..|||.|:|:..|.||||..|.:||..||...|.||
  Rat    76 KIVEKQNETCYFGTPVF-------NLVSLVLGLVGCIGMGIVANFQELAVPVVHDGGALLAFVCG 133

  Fly   133 TLYFWMQALISYLIFPMSGTRINAHLRLGMSVV-CTILFILLAVTGVMSHILFKGQNPRKWYPSD 196
            .:|..:|::|||...|...:....|:|:.:|.| |..:..::|...::|      ....:|.|.:
  Rat   134 VVYTLLQSIISYKSCPQWNSLTTCHVRMAISAVSCAAVVPMIACASLIS------ITKLEWNPKE 192

  Fly   197 GGWYFHVVSSISEWVIATVFSFFILSFTNEFRDVSL 232
            ..:.:||||:|.||.:|..|.|:.|:|..:|:.|:|
  Rat   193 KDYMYHVVSAICEWTVAFGFIFYFLTFIQDFQSVTL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4025NP_569979.1 Frag1 5..230 CDD:431193 80/227 (35%)
Dram1NP_001166898.1 Frag1 7..224 CDD:431193 79/225 (35%)

Return to query results.
Submit another query.