DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4025 and Tmem150a

DIOPT Version :10

Sequence 1:NP_569979.1 Gene:CG4025 / 31177 FlyBaseID:FBgn0025624 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_620807.1 Gene:Tmem150a / 245966 RGDID:619998 Length:271 Species:Rattus norvegicus


Alignment Length:267 Identity:73/267 - (27%)
Similarity:111/267 - (41%) Gaps:70/267 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQVYLLPVLTFLIFQVTFLGT-YIFAVLEGHVVPT---------------------------VP 37
            |:...|||| :...|.:|.:.| |..||:..||.|.                           ||
  Rat     1 MTAWILLPV-SLSAFSITGIWTVYAMAVMNRHVCPVENWSYNDSCSPDPAEQGGPKTCCTLDDVP 64

  Fly    38 YISDAATYSPESCVFGQLINIGSVLLGITIYVRYRQVLQLYEHHPDLDGSVLRQNRLALWFGLVS 102
            .||...||.||||:|..:.|:|:.::.:...:||.|:|:...|      |.:  |..||..|..:
  Rat    65 LISKCGTYPPESCLFSLIGNMGAFMVALICLLRYGQLLEQNRH------SWI--NTTALITGCTN 121

  Fly   103 CLGISFVGNFQETNVRIVHFIGAFCCFGCGTLYFWMQALISY--LIFPMSGTRINAHLRLGMSVV 165
            ..|:..|||||..:.:.:|:|||...|..|.|:..:..::.|  ...|:.  ...|:||   ||:
  Rat   122 AAGLVVVGNFQVDHAKSLHYIGAGVAFPAGLLFVCLHCVLFYHGATTPLD--MAMAYLR---SVL 181

  Fly   166 CTILFILLAVTGVMSHILFKGQNPRKWYPSDGGWYFHVVS------SISEWVIATVFSFFILSFT 224
            ..|.|:.|.::||                    ::.|..|      ::.|||.......|..:|:
  Rat   182 AVIAFVTLVLSGV--------------------FFLHESSELQHGAALCEWVFVLDILIFYGTFS 226

  Fly   225 NEFRDVS 231
            .||..||
  Rat   227 YEFGAVS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4025NP_569979.1 Frag1 5..230 CDD:431193 70/260 (27%)
Tmem150aNP_620807.1 Frag1 3..229 CDD:431193 68/259 (26%)
transmembrane domain 1 5..25 8/20 (40%)
transmembrane domain 2 80..96 2/15 (13%)
transmembrane domain 3 111..128 5/16 (31%)
transmembrane domain 4 141..162 6/20 (30%)
transmembrane domain 5 179..197 7/37 (19%)
transmembrane domain 6 209..227 5/17 (29%)

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