DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4199 and ndh

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_415627.1 Gene:ndh / 946792 ECOCYCID:EG10649 Length:434 Species:Escherichia coli


Alignment Length:451 Identity:82/451 - (18%)
Similarity:138/451 - (30%) Gaps:156/451 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 IVVGGGPSGAVAVETIRQEGFTGRLIFVCREDYLPYDRVKISKAMNLEIEQLRFRDEEFYKEYDI 247
            ::||||..|   :|...|.|.                  |:.:....:|..:.......:|....
E. coli     9 VIVGGGAGG---LEMATQLGH------------------KLGRKKKAKITLVDRNHSHLWKPLLH 52

  Fly   248 ELWQGVAAEKLDTAQKELHCSN-------GYV----------------------------VKYDK 277
            |:..|...|.:|......|..|       |.|                            :.||.
E. coli    53 EVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDT 117

  Fly   278 IYLATGCSAFRPPIPGVN-----LENVRTVRELADTKAIL-----ASITPESRV--VCLGSSFIA 330
            :.:|.|.::.....|||.     |:|....|........|     |::....:|  ..:|.....
E. coli   118 LVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGATG 182

  Fly   331 LEAAA---------------GLVSKVQSVTVV--GRENVP-----LKAAFGAEIGQRVLQLFEDN 373
            :|.:|               ||.::..:||:|  |...:|     :.||...|:.:..:::....
E. coli   183 VELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQT 247

  Fly   374 KVVMRMESGIAEIVGNEDGKVSEVVLVDDTRLPCDLLILGTGSKLNTQFLAKSGVKVNRNGSVDV 438
            .|....|.|:    ..:||:..|          .||::...|.|.........|::.||...:.|
E. coli   248 MVTSADEGGL----HTKDGEYIE----------ADLMVWAAGIKAPDFLKDIGGLETNRINQLVV 298

  Fly   439 TDFLE-SNVPDVYVGGDIANA--HIHGLAHDRVNIGHYQ--------LAQYHGRVAAINMCGGVK 492
            ...|: :..||:|..||.|:.  ...|....|....|..        |||.:|:           
E. coli   299 EPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGK----------- 352

  Fly   493 KLEAVPFFFTLIFGKGIRYAGHGSY------------------KDVIIDGSMEDFKFVAYF 535
                 |.       |..:|..|||.                  ..::|:|.:..|.:::.:
E. coli   353 -----PL-------KNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLY 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560
Pyr_redox_2 183..465 CDD:285266 67/353 (19%)
Pyr_redox 320..402 CDD:278498 20/105 (19%)
Reductase_C 505..577 CDD:291425 8/49 (16%)
ndhNP_415627.1 Ndh 6..423 CDD:224172 82/451 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
10.910

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