DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4199 and MDHAR

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_566361.1 Gene:MDHAR / 820155 AraportID:AT3G09940 Length:441 Species:Arabidopsis thaliana


Alignment Length:441 Identity:104/441 - (23%)
Similarity:183/441 - (41%) Gaps:78/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FIVVGGGPSGAVAVETIRQEGF-TGRLIFVCREDYLPYDRVKISKA-MNLEI------------- 231
            ::::|||.:|..|......:|. .|.|..:.:|...|::|.:::|. ::||:             
plant     9 YVIIGGGVAGGYAAREFSNQGLKPGELAIISKEPVPPFERPELTKVYIDLEVNPTLANIYVCAGT 73

  Fly   232 -EQLRFRDEEFYKEYDIELWQGVAAEKLDTAQKELHCSNGYVVKYDKIYLATGCSAFRPPIPGV- 294
             |..::  ..:|||..|:|..|....|.|.|.|.|...:|.:.||..:.:|||.:..|....|| 
plant    74 GEAKQY--PNWYKEKGIDLIVGTEIVKADLASKTLVSDDGKIYKYQTLLIATGSTNIRLSEIGVQ 136

  Fly   295 --NLENVRTVRELADTKAILASI---TPESRVVCLGSSFIALEAAAGLVSKVQSVTVVGRENVPL 354
              :::|:..:||:.|:..:..::   ....:.|.:|..|:.||.::.|.:....||:|..|...:
plant   137 EADVKNIFYLREIEDSDELALAMELYVQRGKAVIIGGGFLGLEISSALRANNHEVTMVFPEPWLV 201

  Fly   355 KAAFGAEIGQRVLQLFEDNKVVMRMESGIAE-IVGNEDGKVSEVVLVDDTRLPCDLLILGTGSKL 418
            ...|.|||.. ..:.:..||.:..::..:|. ...|.||:|:||.|.|...|..::::.|.|::.
plant   202 HRFFTAEIAS-FYESYYANKGIKIIKGTVATGFSTNSDGEVTEVKLEDGRTLEANIVVAGVGARP 265

  Fly   419 NTQFLAKSGVKVNRNGSVDVTDFLESNVPDVYVGGDIANAHIHGLAHDRVNIGHYQLAQYHG--R 481
            .|...  .|......|.:....|.:::|||||..||:|.               :.:..|.|  |
plant   266 ATSLF--KGQLEEEKGGIKTDGFFKTSVPDVYALGDVAT---------------FPMKMYGGTRR 313

  Fly   482 V-----AAINMCGGVKKLEA------------VPFFFTLIFGKGIRYAGHGSYKDVII---DGSM 526
            |     |..:....||.::|            :|:|::..|.....:.|....:.|:.   |...
plant   314 VEHADNARKSAAQAVKAIKAGEEGKTIPDYDYLPYFYSRFFKLSWEFYGENVGESVLFGDNDPKS 378

  Fly   527 EDFKFVAYFINEADTV------------TAVASCGR-DPIVAQFAELISQG 564
            ...||..|::.:...|            .|:|...| .|.|.....|..:|
plant   379 PKPKFGTYWVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDVLSEEG 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560
Pyr_redox_2 183..465 CDD:285266 79/304 (26%)
Pyr_redox 320..402 CDD:278498 24/82 (29%)
Reductase_C 505..577 CDD:291425 15/76 (20%)
MDHARNP_566361.1 Pyr_redox_2 31..324 CDD:400379 78/312 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 116 1.000 Domainoid score I1964
eggNOG 1 0.900 - - E1_COG0446
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I2003
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405030at2759
OrthoFinder 1 1.000 - - FOG0001279
OrthoInspector 1 1.000 - - mtm1154
orthoMCL 1 0.900 - - OOG6_100481
Panther 1 1.100 - - O PTHR43557
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

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