DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4199 and gsr

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_005169649.1 Gene:gsr / 553575 ZFINID:ZDB-GENE-050522-116 Length:500 Species:Danio rerio


Alignment Length:490 Identity:104/490 - (21%)
Similarity:172/490 - (35%) Gaps:131/490 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FIVVGGGPSGAVAVETIRQEGFTGRLIFVCREDYLPYDRVKI----SKAM-NLEIEQLRFRDEEF 241
            |:|||||..|........:.|.|..:|   ....|....|.:    .|.| |.........|.| 
Zfish    42 FLVVGGGSGGLAGARRAAELGATTAVI---ESHRLGGTCVNVGCVPKKVMWNTSTHAEYLHDHE- 102

  Fly   242 YKEYDIE------LWQGVAAEKLDTAQKELHCSNGYVVKYDKIYLAT----------GCSAFR-P 289
              :|..|      .||.:.           |..:.||.:.::||.:.          |.:.|. .
Zfish   103 --DYGFEGAKAHFSWQIIK-----------HKRDAYVSRLNQIYRSNLEKGKIEFIHGYARFTDD 154

  Fly   290 PIPGVNLENVR---------------TVRELADTKAILASITPE---------SRVVCLGSSFIA 330
            |.|.|.:...:               ||.| .|.......||.:         .|.|.:|:.:||
Zfish   155 PEPTVEVNGKKYTATHILISTGGHPSTVSE-DDVPGSSLGITSDGFFELESCPKRSVIVGAGYIA 218

  Fly   331 LEAAAGLVSKVQSVT-VVGRENVPLKAAFGAEIGQRVLQLFEDNKVVMRMESGIAEIVGNEDGKV 394
            :| .||::|.:.|.| ::.|:...|: .|.|.|.....:..::|.:.:|..:.:..:  .::||.
Zfish   219 VE-MAGILSTLGSKTSIIIRQGGVLR-NFDALISSNCTKELQNNGIDLRKNTQVKSV--KKNGKG 279

  Fly   395 SEVVLVD------------DTRLPCDLLILGTGSKLNTQ--FLAKSGVKVNRNGSVDVTDFLESN 445
            ..:.||.            ||....|.|:...|.:.||.  .|::.|||::..|.:.|.:|..::
Zfish   280 LSITLVTKDPDDKDSQEKFDTINDVDCLLWAIGREPNTAGLNLSQIGVKLDERGHIVVDEFQNTS 344

  Fly   446 VPDVYVGGDIAN---------------AH--IHGLAHDRVNIGHYQLAQY-HGRVAAINMCGGVK 492
            .|.||..||:..               ||  ..|.|..:|:..:.....: |..:..:    |:.
Zfish   345 RPGVYAVGDVCGRALLTPVAIAAGRKLAHRLFEGKADSKVDYNNIPTVVFSHPPIGTV----GLT 405

  Fly   493 KLEAVPFF-------FTLIFGKGIRYAGHGSYKDVIIDGSMEDFKFVAYFINEADTVTAVASCGR 550
            :.|||..:       :|..|..        .|..:....|....|.|....||......:...|.
Zfish   406 EDEAVKTYGKDKVKVYTTSFTP--------MYYAITTRKSQCIMKLVCAGENEKVVGLHMQGFGC 462

  Fly   551 DPIVAQFAELISQGKCLGRGQIEDPATREDWTKKL 585
            |.::..||..::.|           ||:.|:.:.:
Zfish   463 DEMLQGFAVAVNMG-----------ATKADFDRTI 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560
Pyr_redox_2 183..465 CDD:285266 80/359 (22%)
Pyr_redox 320..402 CDD:278498 22/94 (23%)
Reductase_C 505..577 CDD:291425 12/71 (17%)
gsrXP_005169649.1 gluta_reduc_1 56..500 CDD:273614 97/476 (20%)
Pyr_redox 208..284 CDD:278498 20/79 (25%)
Pyr_redox_dim 390..498 CDD:280934 21/120 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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