DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4199 and sqor

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_005163218.1 Gene:sqor / 550580 ZFINID:ZDB-GENE-050417-436 Length:483 Species:Danio rerio


Alignment Length:343 Identity:59/343 - (17%)
Similarity:109/343 - (31%) Gaps:121/343 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 HGACFNLENGDIEDFPGLDSLPCYRVEV--GNEGQVMLRAKRSDLVNNKRLKNMVRRKPDD---- 178
            :|..|::.|..|....||.:...|:|.|  |..|.:.:.|:   |......:|:...:|.:    
Zfish    53 YGRVFSVFNSQIHTGSGLAAKDHYKVLVLGGGSGGIAMAAR---LKRKVGAENVAIVEPSEMHYY 114

  Fly   179 QRVFIVVGGG----PSGAVAVETIRQEGFTGRLIFVCREDYLPYDRVKISKAMNLEIEQLRFRDE 239
            |.::.:||.|    .|...:..::...|.|                                   
Zfish   115 QPIWTLVGAGAKSVASSGRSTSSVIPSGVT----------------------------------- 144

  Fly   240 EFYKEYDIELWQGVAAEKLDTAQKELHCSNGYVVKYDKIYLATGC-----------SAFRPPIPG 293
                      |......:.|..:..:|...|..:.||.:.:|.|.           ..|..|..|
Zfish   145 ----------WVKSKVAEFDPEKNTVHTDCGKKISYDYLIVALGLELHYEKIKGLPEGFEHPKIG 199

  Fly   294 VNLENVRTVRELADTKAILASITPESRVVCLGSSFIALEAAAGLVSKVQSVTVVGRENVPLKAAF 358
            .|. :::||.:..|                            .|.|..:...:....|.|:|.| 
Zfish   200 SNY-SLKTVEKTWD----------------------------ALKSFKEGNALFTFPNTPVKCA- 234

  Fly   359 GAEIGQRVLQLFEDNKVVMRMESGIAEIVGNEDGKVSEVVLVDDTRLPCDLLILGTGSKLNT--Q 421
            ||.  |:::.|              ::....:.||.|:..::.:|.||   ::.|.....:.  :
Zfish   235 GAP--QKIMYL--------------SDAFLRKTGKRSKANIIFNTSLP---VLFGVKKYADALWE 280

  Fly   422 FLAKSGVKVN-RNGSVDV 438
            .:.|..:.|| |:..::|
Zfish   281 IVKKRDLNVNLRHNLIEV 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560 11/35 (31%)
Pyr_redox_2 183..465 CDD:285266 43/274 (16%)
Pyr_redox 320..402 CDD:278498 13/81 (16%)
Reductase_C 505..577 CDD:291425
sqorXP_005163218.1 FadH2 78..418 CDD:223523 52/318 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0446
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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