DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4199 and aifm1

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001017244.1 Gene:aifm1 / 549998 XenbaseID:XB-GENE-1016872 Length:636 Species:Xenopus tropicalis


Alignment Length:504 Identity:104/504 - (20%)
Similarity:186/504 - (36%) Gaps:137/504 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 EVGNEGQVMLRAKRSDLVNNKRLKNMVRRKPDDQR----VFIVVGGGPSGAVAVETIRQEGFTGR 206
            |..:|.:.:...:.:.:|:|:.....|......|.    .|:::|||.:...|..:||......|
 Frog   116 ETIDEQKAVKEVEATGMVDNQTAPQTVESAHPAQLPS
HVPFLLIGGGTASFAAARSIRARDPGAR 180

  Fly   207 LIFVCREDYLPYDRVKISKAMNLE-----IEQLRFRD------------EEFY---------KEY 245
            ::.|..|..|||.|..:||.:...     .|.|||:.            ..||         :..
 Frog   181 VLIVSDESELPYMRPPLSKELWFSEDPHVTETLRFKQWNGKERSIFFQPPSFYVPPEQLMSVENG 245

  Fly   246 DIELWQGVAAEKLDTAQKELHCSNGYVVKYDKIYLATGCSAFRPPIPGVNL--ENV--RTV--RE 304
            .:.:..|.....:|..:.::...:|..:.|:|..:|||  .....:|.:..  |.|  ||.  |.
 Frog   246 GVSVLTGKKVVHMDVRENKVKLDDGTQISYEKCLIATG--GVPRSLPAIERAGEEVTKRTTLFRR 308

  Fly   305 LADTKAILASITPESRVVCLGSSFIALEAAAGLVSKVQSVTVVGRENVPLKAAFGAEIGQRVLQL 369
            ::|.:.:.|..:....:..:|..|:..|.|..|          ||:        |.:....|:|:
 Frog   309 ISDFRTLEAISSSVGSITIIGGGFLGSELACAL----------GRK--------GTQTSLEVIQM 355

  Fly   370 FEDN----KV------------VMR-----MESGIAEIVGNEDGKVSEVVLVDDTRLPCDLLILG 413
            |.::    ||            |.|     :...:.:.|..::||: .:.|.|..::..|.::..
 Frog   356 FPESGNMGKVLPEYLSHWTTEKVQREGVNVLSDAVVKSVSYQNGKL-HIQLKDGRQVQTDHIVAA 419

  Fly   414 TGSKLNTQFLAKSGVKVNRN-GSVDVTDFLESNVPDVYVGGDIANAHIHGLAHDRVNIGHYQLAQ 477
            .|.:.||:....:|::::.: |...|...|::. .:|:|.||.|..:...|...||.  |:..|.
 Frog   420 VGLEPNTELAKSAGLELDGDFGGYRVNAELQAR-NNVWVAGDAACFYDIKLGRRRVE--HHDHAV 481

  Fly   478 YHGRVAAINMCGGVKKLEAVPFFFTLIF----GKGIRYAGHGSYKDVIIDGSMEDFKFVAYFINE 538
            ..||:|..||.|..|     |::...:|    |..:.|...|     |:|.::            
 Frog   482 VSGRLAGENMTGAAK-----PYWHQSMFWSDLGPEVGYEAIG-----IVDSAL------------ 524

  Fly   539 ADTVTAVASCGRDPIVAQFAELISQGKCLGRGQIEDPATREDWTKKLGQ 587
                         |.|..||:                ||.:|..|:..:
 Frog   525 -------------PTVGVFAK----------------ATEKDTPKRAAE 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560 2/7 (29%)
Pyr_redox_2 183..465 CDD:285266 71/335 (21%)
Pyr_redox 320..402 CDD:278498 19/102 (19%)
Reductase_C 505..577 CDD:291425 10/75 (13%)
aifm1NP_001017244.1 AIF-MLS <67..>152 CDD:373428 6/35 (17%)
Pyr_redox_2 159..484 CDD:369639 75/348 (22%)
AIF_C 487..616 CDD:373245 20/109 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43557
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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