DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4199 and Aifm3

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_008767097.1 Gene:Aifm3 / 303786 RGDID:1306028 Length:608 Species:Rattus norvegicus


Alignment Length:585 Identity:214/585 - (36%)
Similarity:330/585 - (56%) Gaps:30/585 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EYKTTGSTPKKEK-------STGGAVGSYQSKCSNQSPSTTMSTEESSPDSE-YTSAVPVD---- 60
            |.|.....|:||:       |..|:...||    ....:.....||..|..: |.|  |.|    
  Rat    12 ELKIEVVLPEKERGKEELSASGKGSPRGYQ----GNGTARHFHAEERLPTPQPYPS--PQDCVEA 70

  Fly    61 --CRVTDLKENEMKQVDFDEDTRVLLVKQNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGAC 123
              |.|.||:..:|::|:.... :|||||.|....|:|.||.||||||..|.|..|||||||||||
  Rat    71 TVCHVKDLENGQMREVELGWG-KVLLVKDNGEFHALGHKCPHYGAPLVKGVLSRGRVRCPWHGAC 134

  Fly   124 FNLENGDIEDFPGLDSLPCYRVEVGNEGQVMLRAKRSDLVNNKRLKNMVR----RKPDDQRVFIV 184
            ||:..||:|||||||||..::|::..| :|.:||.:..|...:|.|.|.:    .........::
  Rat   135 FNIGTGDLEDFPGLDSLHKFQVKIEKE-KVTVRASKQALQLQRRTKVMAKCISPSAGHSSTNVLI 198

  Fly   185 VGGGPSGAVAVETIRQEGFTGRLIFVCREDYLPYDRVKISKAMNLEIEQLRFRDEEFYKEYDIEL 249
            ||.|.:|.|..||:|||||:.|::....:.:|||||.|:||:::.:.|||..|.:||::.|.||:
  Rat   199 VGAGAAGLVCAETLRQEGFSDRIVLCTLDRHLPYDRAKLSKSLDAQPEQLALRPKEFFRAYGIEM 263

  Fly   250 WQGVAAEKLDTAQKELHCSNGYVVKYDKIYLATGCSAFRPPIPGVNLENVRTVRELADTKAILAS 314
            ........:|...|::...:|:.::|.|:.||.|.|.......|.::|||.|:|...|...:|..
  Rat   264 LTEAQVVTVDVRNKKVVFKDGFKLEYSKLLLAPGSSPKTLTCKGKDIENVFTIRTPEDANRVLRL 328

  Fly   315 ITPESRVVCLGSSFIALEAAAGLVSKVQSVTVVGRENVPLKAAFGAEIGQRVLQLFEDNKVVMRM 379
            ....:.|| :|:.|:.:|.||.|..|..||:||..|..|.:...|..:|:.::::||:|:|...|
  Rat   329 ARGRNAVV-VGAGFLGMEVAAYLTEKAHSVSVVELEETPFRRFLGERVGRALMKMFENNRVKFYM 392

  Fly   380 ESGIAEIVGNEDGKVSEVVLVDDTRLPCDLLILGTGSKLNTQFLAKSGVKVNRNGSVDVTDFLES 444
            ::.::|:...| ||:.||||.....|..|:.::|.|:...|.||.:||:.::..|.:.|...:::
  Rat   393 QTEVSELRAQE-GKLQEVVLKSSKVLRADVCVVGIGAVPATGFLRQSGIGLDSRGFIPVNKMMQT 456

  Fly   445 NVPDVYVGGDIANAHIHGLAHDRVNIGHYQLAQYHGRVAAINMCGGVKKLEAVPFFFTLIFGKGI 509
            |:|.|:..||.....:....:.:|||.|:|:|...|||||.||.....::..||:.:|.:|||.:
  Rat   457 NIPGVFAAGDAVTFPLAWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEAEINTVPYLWTAMFGKSL 521

  Fly   510 RYAGHG-SYKDVIIDGSMEDFKFVAYFINEADTVTAVASCGRDPIVAQFAELISQGKCLGRGQIE 573
            ||||:| .:.||||.|.:|:.||||:: .:.|.|.||||...||||::.||:::.|:.:.:.::|
  Rat   522 RYAGYGEGFDDVIIQGDLEELKFVAFY-TKGDEVIAVASMNYDPIVSKVAEVLASGRAIRKREVE 585

  Fly   574  573
              Rat   586  585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560 51/100 (51%)
Pyr_redox_2 183..465 CDD:285266 93/281 (33%)
Pyr_redox 320..402 CDD:278498 30/81 (37%)
Reductase_C 505..577 CDD:291425 32/70 (46%)
Aifm3XP_008767097.1 Rieske_AIFL_N 70..163 CDD:239560 50/94 (53%)
Pyr_redox_2 194..492 CDD:400379 99/299 (33%)
Reductase_C 511..>561 CDD:405449 25/50 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 187 1.000 Domainoid score I3238
eggNOG 1 0.900 - - E1_COG0446
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I2094
OMA 1 1.010 - - QHG58553
OrthoDB 1 1.010 - - D183405at33208
OrthoFinder 1 1.000 - - FOG0001279
OrthoInspector 1 1.000 - - otm44669
orthoMCL 1 0.900 - - OOG6_100481
Panther 1 1.100 - - O PTHR43557
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1666
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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