DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4199 and Txnrd2

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_038739.2 Gene:Txnrd2 / 26462 MGIID:1347023 Length:527 Species:Mus musculus


Alignment Length:347 Identity:69/347 - (19%)
Similarity:125/347 - (36%) Gaps:102/347 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 DKIYLATGCSAFRPPIP---------GVNLENVRTVRELADTKAILASITPESRVVCLGSSFIAL 331
            :.|.:|||   .||..|         |:..:::..::|           :| .:.:.:|:|::||
Mouse   185 EHIVIATG---GRPRYPTQVKGALEYGITSDDIFWLKE-----------SP-GKTLVVGASYVAL 234

  Fly   332 EAAAGLVSKVQSVTVVGRENVPLKAAFGAEIGQRVLQLFEDNKV----------VMRMESGIAEI 386
            | .||.::.:...|.|...::||: .|..::...|.:..|.:..          :.::.:...::
Mouse   235 E-CAGFLTGIGLDTTVMMRSIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQV 297

  Fly   387 V------GNEDGKVSEVVLVDDTRLPCDLLILGTGSKLNTQFLAKSGVKVNRNGSVDVTDFLE-S 444
            .      |.||....:.||....|:|          :..|..|.|:|:..|......:.|..| :
Mouse   298 TWEDHASGKEDTGTFDTVLWAIGRVP----------ETRTLNLEKAGISTNPKNQKIIVDAQEAT 352

  Fly   445 NVPDVYVGGDIANAHIHGLAHDRVNIGHYQLAQYHGRVAAI----NM-----------CGGVKKL 494
            :||.:|..||:|..... |....:..|.....:..|:.:.:    |:           |.|:.:.
Mouse   353 SVPHIYAIGDVAEGRPE-LTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEE 416

  Fly   495 EAVPFFFTLIFGKGIRYAGHGSYKDVII-----DGSMEDFKFVAYFINEADTVTAVASCGRDP-- 552
            |||     .:.|:......|..||.:..     |.|....|.|               |.|:|  
Mouse   417 EAV-----ALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMV---------------CMREPPQ 461

  Fly   553 ------IVAQFAELISQGKCLG 568
                  .:...|..::||..||
Mouse   462 LVLGLHFLGPNAGEVTQGFALG 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560
Pyr_redox_2 183..465 CDD:285266 45/214 (21%)
Pyr_redox 320..402 CDD:278498 19/97 (20%)
Reductase_C 505..577 CDD:291425 16/77 (21%)
Txnrd2NP_038739.2 TGR 43..527 CDD:273624 69/347 (20%)
NADB_Rossmann 43..>70 CDD:304358
Pyr_redox 223..289 CDD:278498 14/67 (21%)
Pyr_redox_dim 399..508 CDD:280934 21/105 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.