DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4199 and F20D6.11

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_505112.1 Gene:F20D6.11 / 179196 WormBaseID:WBGene00017640 Length:549 Species:Caenorhabditis elegans


Alignment Length:507 Identity:169/507 - (33%)
Similarity:286/507 - (56%) Gaps:10/507 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RVTDLKENEMKQVDFDEDTRVLLVKQNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFNL 126
            |:.|:.....|..:. .|.:||::....|:.|:...|:||...|:.|....||:|||.||||||:
 Worm    28 RIEDVPPGTKKMFEV-RDRKVLVINDEGRIYAINGLCSHYNFSLENGTYAKGRIRCPLHGACFNV 91

  Fly   127 ENGDIEDFPGLDSLPCYRVEVGNEGQVMLRAKRSDLVNNKRLKNMVRRKPDDQRVFIVVGGGPSG 191
            .:|||||:||.|||..|.|.| |:|.::::.....|.:::|::::.:.|..:.|..:::|||.:.
 Worm    92 RSGDIEDYPGFDSLHSYVVTV-NDGNLIIKTTEKKLGSDRRIRHLPKMKQCNDRPVVIIGGGVAT 155

  Fly   192 AVAVETIRQEGFTGRLIFVCREDYLPYDRVKISKAMNLEIEQLRFR-DEEFYKEYDIELWQGVAA 255
            |..:|..|..|....::.:..|...|||||.:||......|.:|.| |:.||:|.:::.....:.
 Worm   156 ATFIEHSRLNGLITPILVISEESLPPYDRVLLSKKPAATGEDIRLRKDDAFYEERNVKFLLKTSV 220

  Fly   256 EKLDTAQKELHCSNGYVVKYDKIYLATGCSAFRPPIPGVNLENVRTVRELADTKAILASITPESR 320
            ..::...:|:..|||..|.|.|:.:|||.:..:..:||.:|:|:..:|::.:.. |::::.|...
 Worm   221 IAVNHKSREVSLSNGETVVYSKLIIATGGNVRKLQVPGSDLKNICYLRKVEEAN-IISNLHPGKH 284

  Fly   321 VVCLGSSFIALEAAAGLVSKVQSVTVVGRENVPLKAAFGAEIGQRVLQLFEDNKVVMRMESGIAE 385
            |||:|||||.:|.|:.|..|..||||:.....|| ..||::||:.:...||:..|...:.:.:..
 Worm   285 VVCVGSSFIGMEVASALAEKAASVTVISNTPEPL-PVFGSDIGKGIRLKFEEKGVKFELAANVVA 348

  Fly   386 IVGNEDGKVSEVVLVDDTRLPCDLLILGTGSKLNTQFLAKSGVKVNRNGSVDVTDFLESNVPDVY 450
            :.||:.|:||:|:|.:...|..|||:.|.|....|:||..||:|::..|.::|.:...:|:..::
 Worm   349 LRGNDQGEVSKVILENGKELDVDLLVCGIGVTPATKFLEGSGIKLDNRGFIEVDEKFRTNISYIF 413

  Fly   451 VGGDIANAHIHGLAHDRVNIGHYQLAQYHGRVAAINMCGGVKKLEAVPFFFTL-IFGKGIRYAG- 513
            ..||:..|.:.....|.:||.|:|.||.||:.....:.|..:....||:|:|| .|..|::::| 
 Worm   414 AMGDVVTAPLPLWDIDSINIQHFQTAQAHGQHLGYTIVGKPQPGPIVPYFWTLFFFAFGLKFSGC 478

  Fly   514 -HGSYKDVIIDGSMEDFKFVAYFINEADTVTAVASCGRDPIVAQFAELISQG 564
             .||.|: ..:|..|...|:.||:.: |.|.|||:.|...:.:||||:..:|
 Worm   479 NQGSTKE-YTNGDPETGTFIRYFLKK-DKVVAVAAGGPSSVASQFAEIFKKG 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560 39/91 (43%)
Pyr_redox_2 183..465 CDD:285266 89/282 (32%)
Pyr_redox 320..402 CDD:278498 32/81 (40%)
Reductase_C 505..577 CDD:291425 22/62 (35%)
F20D6.11NP_505112.1 Rieske_AIFL_N 29..118 CDD:239560 38/90 (42%)
Pyr_redox_2 147..443 CDD:369639 96/297 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159343
Domainoid 1 1.000 176 1.000 Domainoid score I2156
eggNOG 1 0.900 - - E1_COG0446
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H135034
Inparanoid 1 1.050 302 1.000 Inparanoid score I1614
Isobase 1 0.950 - 0 Normalized mean entropy S3886
OMA 1 1.010 - - QHG58553
OrthoDB 1 1.010 - - D183405at33208
OrthoFinder 1 1.000 - - FOG0001279
OrthoInspector 1 1.000 - - otm14512
orthoMCL 1 0.900 - - OOG6_100481
Panther 1 1.100 - - LDO PTHR43557
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R33
SonicParanoid 1 1.000 - - X1666
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

Return to query results.
Submit another query.