DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4199 and aifm3

DIOPT Version :9

Sequence 1:NP_001188537.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_012823655.1 Gene:aifm3 / 100493696 XenbaseID:XB-GENE-5763104 Length:618 Species:Xenopus tropicalis


Alignment Length:590 Identity:216/590 - (36%)
Similarity:337/590 - (57%) Gaps:42/590 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KKEKSTGGAVGSYQSKCSNQSPSTTMSTEESSPD--SEYTSAVPVD------CRVTDLKENEMKQ 73
            |:|.|..|.......|.:.   :|.:...|..|.  :.||:  |.|      |.|.||:..:|::
 Frog    26 KEEMSPNGKASPLAYKANG---TTRLYHHEERPIVLNPYTN--PKDVVEASVCHVKDLENGQMRE 85

  Fly    74 VDFDEDTRVLLVKQNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFNLENGDIEDFPGLD 138
            ||.. ..:.||||||....|:|.||.||||||..|.|..|||||||||||||:..||||||||||
 Frog    86 VDLG-CGKALLVKQNGEYYAMGHKCPHYGAPLVKGVLSKGRVRCPWHGACFNIATGDIEDFPGLD 149

  Fly   139 SLPCYRVEVGNEGQVMLRAKRSDLVNNKRLKNMVR-----RKPDDQRVFIVVGGGPSGAVAVETI 198
            :||.::|::..| :|.:||.:..|.:.:|.|.|.:     .........:::|.||:|.|..||:
 Frog   150 ALPKFQVKIEKE-RVYIRASKQALQSQRRTKVMAKCIALSNYSAAITNILIIGAGPAGLVCAETL 213

  Fly   199 RQEGFTGRLIFVCREDYLPYDRVKISKAMNLEIEQLRFRDEEFYKEYDIELWQGVAAEKLDTAQK 263
            |||||:.|::....|..|||||.|:||:|:.:.||:..|.:||:..||||:........:||..|
 Frog   214 RQEGFSDRIVMCTSEKNLPYDRSKLSKSMDSQAEQIFLRSKEFFHTYDIEVLTESQVVGVDTKNK 278

  Fly   264 ELHCSNGYVVKYDKIYLATGCSAFRPPIPGVNLENVRTVRELADTKAILASITPESRVVCLGSSF 328
            .:...:|:.::|:|:.:|||.:.......|..|:||.|:|...|...::...:.::.|: :|:||
 Frog   279 MVLFKDGFRMEYNKLLIATGNTPKTLKCKGKELDNVFTIRTPEDANKVVRLASSKNAVI-VGASF 342

  Fly   329 IALEAAAGLVSKVQSVTVVGRENVPLKAAFGAEIGQRVLQLFEDNKVVMRMESGIAEIVGNEDGK 393
            :.:|.||.|..|..||:||..||:|.|...|.::|..::::||:|:|...|::.::|: ..::||
 Frog   343 LGMEVAAYLCEKAHSVSVVELENIPFKKFLGEKVGLAIMKMFENNRVKFYMQTEVSEL-REQEGK 406

  Fly   394 VSEVVLVDDTRLPCDLLILGTGSKLNTQFLAKSGVKVNRNGSVDVTDFLESNVPDVYVGGDIANA 458
            :.||||.....|..|:.::|.|:...|.||.:|||.::..|.:.|...:::|:|.|:..||:...
 Frog   407 LKEVVLKSGKVLRADVCVIGIGASPTTGFLKQSGVALDSRGYILVNKMMQTNIPGVFAAGDVVTF 471

  Fly   459 HIHGLAHDRVNIGHYQLAQYHGRVAAINMCGGVKKLEAVPFFFTLIFGKGIRYAGHG-SYKDVII 522
            .:....:.:||:.|:|:|...||:||:||.....::..||:.:|.:|||.||||||| .:.||||
 Frog   472 PLAFRNNKKVNVPHWQMAHMQGRIAALNMLAQGTEINTVPYLWTAMFGKSIRYAGHGDGFDDVII 536

  Fly   523 DGSMEDFKFVAYFINEA-------------------DTVTAVASCGRDPIVAQFAELISQGKCLG 568
            .|.:::.||||::..:.                   |.|.||||...||||::.||::|.||.:.
 Frog   537 QGDIDELKFVAFYTRKPKRRFLSYSRMTPCVEHWRNDEVIAVASMNYDPIVSKVAEIMSSGKTIR 601

  Fly   569 RGQIE 573
            :..:|
 Frog   602 KRDVE 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_001188537.1 Rieske_AIFL_N 59..154 CDD:239560 53/100 (53%)
Pyr_redox_2 183..465 CDD:285266 96/281 (34%)
Pyr_redox 320..402 CDD:278498 31/81 (38%)
Reductase_C 505..577 CDD:291425 35/89 (39%)
aifm3XP_012823655.1 Rieske_AIFL_N 70..164 CDD:239560 52/95 (55%)
Pyr_redox_2 195..493 CDD:400379 101/299 (34%)
Reductase_C 512..>582 CDD:405449 26/69 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 210 1.000 Domainoid score I2762
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 416 1.000 Inparanoid score I1777
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183405at33208
OrthoFinder 1 1.000 - - FOG0001279
OrthoInspector 1 1.000 - - mtm9392
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1666
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.