DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4281 and Gpatch2l

DIOPT Version :9

Sequence 1:NP_569973.1 Gene:CG4281 / 31171 FlyBaseID:FBgn0025626 Length:696 Species:Drosophila melanogaster
Sequence 2:XP_006516282.1 Gene:Gpatch2l / 70373 MGIID:1917623 Length:487 Species:Mus musculus


Alignment Length:599 Identity:127/599 - (21%)
Similarity:199/599 - (33%) Gaps:178/599 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDQFSHDLTLALDLTLMDRASGGVGRWGSRRRTRSTGNLPCAPQPTEDSSSSPTDALNQ-----G 60
            ||:..|||..||:.|......|.:  |                   |:.:.||.....|     |
Mouse     1 MDELVHDLASALEQTSEQSKLGEL--W-------------------EEMALSPRQQRRQLRKRRG 44

  Fly    61 HHHGHHGHHHHHH---HTSANVDGLD--THNLKLPA-----SDSDEKAEAMLPLRLPLTLPIRMG 115
            ........|...|   .:.|:...||  |.:.:..|     ||||:...|.   |.|....|..|
Mouse    45 RKRRSDFTHLAEHACCFSEASESSLDEATKDCREVAPLTNFSDSDDTVVAK---RHPALSAIIRG 106

  Fly   116 AL----ESDSLNETTFSPARFYKPNSRRKRKIKRMSMEFEFSKDTSHTFTESPLQPSLLSSSGSA 176
            ..    ||||..|.  :|.|    ..||:||:||::.|                          .
Mouse   107 KQHSWPESDSFTEN--APCR----PLRRRRKVKRVTSE--------------------------V 139

  Fly   177 TGTIRKRLLKIDATGHRSHLFFCGKRKRSNRDRYHEQDSVKLYALPHSQVDDQHVEQPQHQQQRM 241
            ..:::::|...|.:..|...|...|::|.:|.:.:...:...:.|..|..:...:.||..::   
Mouse   140 AASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSSGHGLCESAENRTFLSQPGRKE--- 201

  Fly   242 RPRSYSSTSKPLSDRLLPLNKGLLSKINRMAAQGQQTKHTQKTETKDKDLK--CHRS-------- 296
                                        ||..:.::.||.......:.|..  |..|        
Mouse   202 ----------------------------RMECEAEEQKHGSDENMSECDTSSVCSSSDTGLFTND 238

  Fly   297 EGPEGVSLEMEELPDQKDAVQKLPLPSADFTTAN-FNSISMDTIVPVTDIDALL--LSTP----P 354
            ||.:|    .:|..|.....:.:|    .||..| ....:.|....|..:|:.|  ||.|    |
Mouse   239 EGRQG----DDEQSDWFYEGECVP----GFTVHNLLPKWAPDHCTEVERMDSGLDKLSDPTFLLP 295

  Fly   355 AAPLLR-----------------KKAQGQAPGHSSSSSS-KTERRRRFQTFPQPQLQLQAQSMDC 401
            :.|..|                 :|.:.:.||..:|.|| .|||.....:.|:...:::|.:...
Mouse   296 SRPAQRGYHGRLNRLPGAAARCLRKGRRRLPGKEASMSSLGTERIGHTISDPRQTEKMRALASGS 360

  Fly   402 SEL----YDFLSSSSLSSSTDSEAEVGGHRR----HDTDREGDDELTDWPGNEFGPGARYDPKRK 458
            ..:    ::|...|.| .|.|..|: ..|||    |.:.|:..   ..|     ||....|.|||
Mouse   361 PSISACVHEFNPLSPL-YSLDVLAD-ASHRRCSPAHCSARQAS---VHW-----GPPCPRDIKRK 415

  Fly   459 LTKKSLLPQIRSDDTIGEDDTLMSGTEAGAVGMEPPSKSPVQLPESLQDLSRFQPAGVSE-PIEI 522
              :|.:.....|..:....|.|    |......:||....:....:.:..:.|.||...: |.|.
Mouse   416 --RKPVASASFSSPSPVHPDVL----EPAIPAQKPPDSEWLDGTSAAEKATAFPPATFFKMPQEK 474

  Fly   523 QNACSEMETNADGT 536
            .:.||    ::.||
Mouse   475 NSGCS----SSPGT 484



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D273967at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14195
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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