DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4281 and Gpatch2

DIOPT Version :9

Sequence 1:NP_569973.1 Gene:CG4281 / 31171 FlyBaseID:FBgn0025626 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_080643.4 Gene:Gpatch2 / 67769 MGIID:1915019 Length:527 Species:Mus musculus


Alignment Length:679 Identity:134/679 - (19%)
Similarity:208/679 - (30%) Gaps:251/679 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 HTSANVDGLDTHNLKLPASDSDEKAEAMLPLRLPLTLPIRMGALESDSLNETTFSPARFYKPNSR 138
            |.|..::.| .|:|.....:|.|:|              |.|..|:...:.....|   .|..:|
Mouse    19 HFSRTMEEL-VHDLVSALEESSEQA--------------RGGFAETGEHSRNLSCP---LKRQAR 65

  Fly   139 RKRKIKRMSMEFEFSKDTSHTFTESPLQPSLLSSSGSATGTIRKRLLKIDATGHRSHLFFCGKRK 203
            ::|..||.|.......:|.|..:|           ||.:.      |:..:..:|.      |..
Mouse    66 KRRGRKRRSYNVHHPWETGHCLSE-----------GSDSS------LEEPSKDYRE------KHS 107

  Fly   204 RSNRDRYHEQDSVKLYALPHSQVDDQHVEQPQHQQQRMRPRSYSSTS---------------KPL 253
            .:.:||              |..|||.:      ..:.||.|..|:|               ..|
Mouse   108 NNKKDR--------------SDSDDQML------VAKRRPSSNLSSSVRGKRLLWHESDFAVDSL 152

  Fly   254 SDRLLPLNKGLLSKINRMAAQGQQTKHTQKTETKDKDLKCHRSEGPEGVSLEMEELPDQ---KDA 315
            .:|.|...:    |:.|||....|...:::|.|          :.|||..       ||   .|.
Mouse   153 GNRTLRRRR----KVKRMAVDLPQDVSSKRTMT----------QLPEGCR-------DQDMDNDR 196

  Fly   316 VQKLPLPSADFTTANFNSISMDTIVPVTDIDALLLSTPPAAPLLRKKAQGQAPGHSSSSSS---K 377
            ..:.|    :||...                           :.::|.:|..||..:....   :
Mouse   197 ASQYP----EFTRKK---------------------------VKKRKLKGIRPGPKTQEEGGVLE 230

  Fly   378 TERRRRFQTFPQP---QLQLQAQSMDCSELYDFLSSSSLSSSTDSEAEVGGHRRHDTDREGDDEL 439
            :|.|      .||   :::.:.|... .||.....:||| ||||:     |...:|..|:||||.
Mouse   231 SEER------SQPNKDRMEYEEQKAS-DELRSESDTSSL-SSTDA-----GLFTNDEGRQGDDEQ 282

  Fly   440 TDWPGNEFGPGARYDPKRKLTKKSLLPQIRSDDTIGEDDTLMSGTEAGAVGMEP--PSKSPVQLP 502
            :||         .|:.:                         ||...|..|:.|  ....|.:|.
Mouse   283 SDW---------FYEKE-------------------------SGGACGIAGVVPWWEKDEPAELD 313

  Fly   503 ESLQD-------------------------LSRFQPAGVSEPIEIQNACSEMETNADGTMPASRQ 542
            .:|.|                         |||.. ...|:.|:..:.......:|.|.....|.
Mouse   314 TNLPDPVFESILSGSFPLMSHPGRGGFQARLSRLH-GTPSKNIKKSSGAPPSMLSAPGPGSNKRM 377

  Fly   543 IESEMSGETSNPFLSSSPPG----HAQGQEVREIRAGCRRINGERPGFSIKMSVNERIARFLQDS 603
            :.........:.:.|   ||    |.|.|.:|:.||.    .|.:...|:|.:           |
Mouse   378 VHFSPDAHRHDHWFS---PGARTEHGQHQLLRDNRAE----RGHKKSCSLKTA-----------S 424

  Fly   604 QQTQIRLPDIELYETDSMSNLATLYSLT---MVVEHGCTVLTKTGNTTQTVSMDHLQQGLQPRAD 665
            :||.:.|..:...:.......|.|...|   :|.|:...:|..........||     |..|.:.
Mouse   425 RQTSMHLGSLCTGDIKRRRKAAPLPGPTAAGIVGENAQPILESNIGNRMLQSM-----GWTPGSG 484

  Fly   666 LFGDFKRRCYGEEGEEEGEQQQPLQQDPG 694
            |         |.:|....|..|.:|:..|
Mouse   485 L---------GRDGRGIAEPVQAVQRPKG 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4281NP_569973.1 None
Gpatch2NP_080643.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..135 31/159 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..281 34/166 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..375 4/24 (17%)
G-patch 467..510 CDD:279867 11/52 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 480..527 8/34 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14195
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.