DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4281 and gpatch2

DIOPT Version :9

Sequence 1:NP_569973.1 Gene:CG4281 / 31171 FlyBaseID:FBgn0025626 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001313622.1 Gene:gpatch2 / 555214 ZFINID:ZDB-GENE-041014-260 Length:490 Species:Danio rerio


Alignment Length:674 Identity:133/674 - (19%)
Similarity:198/674 - (29%) Gaps:293/674 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDQFSHDLTLALDLTLMDRASGGVGRWGS----------------RRRTRSTGNLPCAPQPTEDS 49
            ||:..|||..||:.: .::|.||.|..|.                |.|.|.:.|    |.|..| 
Zfish    23 MDELVHDLVSALEES-SEQARGGFGDGGDHALAVGCLLKRQARKRRGRKRRSDN----PHPPWD- 81

  Fly    50 SSSPTDALNQGHHHGHHGHHHHHHHTSANVDGLDTHNLKLPASDSDEKAEAMLPLRLPLTLPIRM 114
                |..|::|..........:...|:|.  |.:|.:..   |||||:..|  ..|.|||.....
Zfish    82 ----TCHLSEGSESSLEEQKDYRSSTAAG--GANTRDNN---SDSDEQLGA--KRRTPLTADSGR 135

  Fly   115 G--ALESDSLNETTFSPARFYKPNSRRKRKIKRMSMEFEFSKDTSHTFTESPLQPSLL---SSSG 174
            |  .|..|.|:.......|    :.||:||:|||::             :.||..:.:   .:..
Zfish   136 GKRPLWLDDLSGADVLGTR----SLRRRRKVKRMAV-------------DPPLDVTAMLAPPAKA 183

  Fly   175 SATGTIRKRLLKIDATGHRSHLFFCGKRKRSNRDRYHEQDSVKLYALPHSQVDDQHVEQPQHQQQ 239
            .|.|            |.|..:|.                       |.::|.|           
Zfish   184 PAVG------------GGRETVFG-----------------------PEAKVSD----------- 202

  Fly   240 RMRPRSYSSTSKPLSDRLLPLNKGLLSKINRMAAQGQQTKHTQKTETKDKDLKCHRSEGPEGVSL 304
                                .||      ||:    ::.|.|.:..|:|        ...|||.:
Zfish   203 --------------------ANK------NRV----KKRKFTVQRLTQD--------VADEGVVV 229

  Fly   305 EMEELPDQKDAVQKLPLPSADFTTANFNSISMDTIVPVTDIDALLLSTPPAAPLLRKKAQGQAPG 369
            |.||                                                           .|
Zfish   230 ESEE-----------------------------------------------------------AG 235

  Fly   370 HSSSSSSKTERRRRFQTFPQPQLQLQAQSMDCSELYDFLSSSSLSSSTDSEAEVGGHRRHDTDRE 434
            ||.                :.::..:.|.....|:.|...:||:|:|:|     ||...:|..|:
Zfish   236 HSL----------------KDKMDFEEQKGSDEEMSDRCETSSVSNSSD-----GGLYTNDEGRQ 279

  Fly   435 GDDELTDW-----PGNEFG----------------------------------PGARYDPKRKLT 460
            ||||.:||     ||...|                                  .||:...:.:|.
Zfish   280 GDDEQSDWFYEGEPGGACGIAGVVPWWERDSNELDLNDPVFNSILTGAFPLMSQGAQRGFQARLA 344

  Fly   461 KKSLLPQIRSDDTIGEDDTL------------MSGTEAGAVGMEPPSKSPVQLPESLQDLSRFQP 513
            :::.|.|.:.... |..|.|            .||.....:..:..|....:...||:..|| |.
Zfish   345 RQTCLEQSQGSSQ-GISDRLPRLSQDPHESWFSSGARRDQLLWDSRSDRSHRKSCSLKTASR-QT 407

  Fly   514 AGVSEPIEIQNACSEMETNADGTMPASRQIESEMSGETSNPFLSSS-----------PPGHAQGQ 567
            :|     .:.:.|:..........|...|..|.:.||::.|...|:           .||...|.
Zfish   408 SG-----HLGSLCTGDIKRRRKAAPVGAQSSSGVVGESAAPLPDSNLGNRMLQSMGWTPGTGLGP 467

  Fly   568 EVR----EIRAGCRRINGERPGFS 587
            |.|    .|||. :|..|...||:
Zfish   468 EGRGITEPIRAS-QRPKGAGLGFN 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4281NP_569973.1 None
gpatch2NP_001313622.1 G-patch 447..490 CDD:279867 12/43 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D273967at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14195
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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