DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik2 and Prkaa1

DIOPT Version :10

Sequence 1:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster
Sequence 2:NP_062015.2 Gene:Prkaa1 / 65248 RGDID:3387 Length:559 Species:Rattus norvegicus


Alignment Length:550 Identity:183/550 - (33%)
Similarity:277/550 - (50%) Gaps:91/550 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 MRVGFYDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQTN-LQKVYREVEIMKRLKHPH 199
            :::|.|.:..|:|.|.|..||:.:|.:|.::||:||:::.::...: :.|:.||::.:|..:|||
  Rat    22 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 86

  Fly   200 IIKLYQVMETKNMIYIVSEYASQGEIFDYIAKYGRMSESAARFKFWQIISAVEYCHKKGIVHRDL 264
            |||||||:.|.:.|::|.||.|.||:||||.|.||:.|..:|..|.||:|.|:|||:..:|||||
  Rat    87 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDL 151

  Fly   265 KAENLLLDLNMNIKIADFGFSNHFKPGELLATWCGSPPYAAPEVFEGKQYTGPEIDIWSLGVVLY 329
            |.||:|||.:||.||||||.||....||.|.|.||||.||||||..|:.|.|||:||||.||:||
  Rat   152 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILY 216

  Fly   330 VLVCGALPFDGSTLQSLRDRVLSGRFRIPFFMSSECEHLIRRMLVLEPTRRYTIDQIKRHRWMCP 394
            .|:||.||||...:.:|..::..|.|..|.:::.....|::.||.::|.:|.||..|:.|.|...
  Rat   217 ALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 281

  Fly   395 ELLEHVLIAKYNLGAE-RQTSVEPSEDILRIMAEYVGIGSDKTRASL-KKNTYDHVAAIYLLLQD 457
            :|      .||....: ..:|....::.|:.:.|......::..:.| .:|..|.:|..|.|:.|
  Rat   282 DL------PKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIID 340

  Fly   458 --RVSHKKEQSNGLGASALASSTSASRMIYSSRNDHQPTQQQSQQ----QSKTISTSSILAKDQC 516
              |:.::.:.      ..||:|...|.:     :||..|:...::    .::|......|  |:.
  Rat   341 NRRIMNEAKD------FYLATSPPDSFL-----DDHHLTRPHPERVPFLVAETPRARHTL--DEL 392

  Fly   517 HKRLSRHQTVLMSERNA--HAG----ATPT------------------VPDPGPGYYAK------ 551
            :.:.|:||.|    |.|  |.|    :.|.                  |.:|   ||.:      
  Rat   393 NPQKSKHQGV----RKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNP---YYLRVRRKNP 450

  Fly   552 ----YGPLQLPL-PLTGHSHLTGYLNGGGVEVDA-SGIPLPMR------YTPLPTAASPA----- 599
                :..:.|.| .:...::|..:.:......:| ||...|.|      |.....:.|.|     
  Rat   451 VTSTFSKMSLQLYQVDSRTYLLDFRSIDDEITEAKSGTATPQRSGSISNYRSCQRSDSDAEAQGK 515

  Fly   600 PSNCSSTSSRVGRHSLSSS------SPRSH 623
            ||..|.|||..   ||.||      .|.||
  Rat   516 PSEVSLTSSVT---SLDSSPVDVAPRPGSH 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 120/252 (48%)
UBA_SIK 418..458 CDD:270523 9/42 (21%)
Prkaa1NP_062015.2 STKc_AMPK_alpha 24..279 CDD:270981 121/254 (48%)
UBA_AID_AAPK1 296..360 CDD:270586 14/69 (20%)
AIS. /evidence=ECO:0000250|UniProtKB:Q13131 302..381 17/89 (19%)
AMPKA1_C 404..557 CDD:213384 31/144 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..536 18/54 (33%)

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