DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sik2 and Smok3c

DIOPT Version :9

Sequence 1:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster
Sequence 2:NP_001297632.1 Gene:Smok3c / 622486 MGIID:3647925 Length:504 Species:Mus musculus


Alignment Length:463 Identity:139/463 - (30%)
Similarity:229/463 - (49%) Gaps:72/463 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 VGAGGISGKDLLKLKEPM--RVGF---YDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLD 178
            :|.|.....:.|:.|.|.  ..||   |.:..|||.|..|.||||:||:|...||:|.|      
Mouse     1 MGPGSQQKSEKLRCKPPFSNMDGFHAQYVMLETIGHGGCATVKLAQHRLTGTHVAVKTI------ 59

  Fly   179 QTNLQK-------VYREVEIMKRLKHPHIIKLYQVMETKNMIYIVSEYASQGEIFDYIAKYGRMS 236
                ||       :..||:::....||::|.|.||:|||..:|::.|......::.:|.|.|.:.
Mouse    60 ----QKRGYWCILIMSEVDLLMMADHPNVISLLQVIETKKKVYLIMELCEGKSLYQHIRKAGYLQ 120

  Fly   237 ESAARFKFWQIISAVEYCHKKGIVHRDLKAENLLLDLNMNIKIADFGFSNHFKPGELLATWCGSP 301
            |..||..|.|::||:.|||.:||||||||.:|::::.:..:||.|||.|...|||:.|..:||:.
Mouse   121 EHEARALFKQLLSAMNYCHNQGIVHRDLKPDNIMVEKDGKVKIIDFGLSTKVKPGQKLNLFCGTY 185

  Fly   302 PYAAPEVFEGKQYTGPEIDIWSLGVVLYVLVCGALPFDGSTLQSLRDRVLSGRFRIPFFMSSECE 366
            |::||||.....|.||:||:|:||||||.:|.|.:|||..:::.|..|:|:|::.||..:|:|..
Mouse   186 PFSAPEVLLSTPYDGPKIDVWTLGVVLYFMVTGKIPFDACSIKRLVKRILAGKYSIPSRLSAELR 250

  Fly   367 HLIRRMLVLEPTRRYTIDQIKRHRWMC------PELLEHVLIAKYNLGAERQTSVEPSEDILRIM 425
            .|:..::...|..|.|:.::..|.|:.      |:            ..|.||.::|...|::.|
Mouse   251 DLLSLLMTANPKLRPTVAEVMVHPWVTEGSGVFPD------------PCEEQTPLKPDPAIVKAM 303

  Fly   426 AEYVGIGSDKTRASLKKNTYDHVAAIYLLLQDRVSHKKEQSNGLGASALASST--------SASR 482
            . ::|..:.....||::..::...|.|.||:.::  .||......|..:..|.        :|:.
Mouse   304 G-HIGFQAQDIEDSLRQRKFNQTMASYCLLKKQI--LKECDRPTRARPVNPSVTPFPSLVDTATT 365

  Fly   483 MIYSSRNDHQPT--------------QQQSQQQSKTISTSSILAKDQCHKRLSRHQTVLMSERNA 533
            .:...|.:::||              :..|:::.:.:|..|:|.:       .||....|.....
Mouse   366 CLGLRRRENEPTCPWSSANRQVSVCGKSTSKKRDRRVSWPSVLGR-------PRHTAPTMDHTRT 423

  Fly   534 HAGATPTV 541
            ...:.|.:
Mouse   424 RTRSVPCI 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 102/261 (39%)
S_TKc 141..392 CDD:214567 101/257 (39%)
Smok3cNP_001297632.1 STKc_AMPK-like 27..275 CDD:270905 101/257 (39%)
UBA_MARK_Par1 295..334 CDD:270522 10/39 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.